WormBase Tree Display for Gene: WBGene00022402
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| WBGene00022402 | SMap | S_parent | Sequence | Y97E10AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lmtr-2 | Person_evidence | WBPerson4071 | |||||
| WBPerson26839 | |||||||||
| Sequence_name | Y97E10AR.7 | ||||||||
| Molecular_name | Y97E10AR.7 | ||||||||
| Y97E10AR.7.1 | |||||||||
| CE25642 | |||||||||
| Other_name | Y97E10AR.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y97E10AR.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | lmtr-2 | ||||||||
| DB_info | Database | AceView | gene | 5I490 | |||||
| WormQTL | gene | WBGene00022402 | |||||||
| WormFlux | gene | WBGene00022402 | |||||||
| NDB | locus_tag | CELE_Y97E10AR.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022402|UniProtKB=Q9N2U6 | |||||||
| family | PTHR13323 | ||||||||
| NCBI | gene | 179177 | |||||||
| RefSeq | protein | NM_072660.8 | |||||||
| SwissProt | UniProtAcc | Q9N2U6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N2U6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Feb 2015 13:16:53 | WBPerson2970 | Name_change | CGC_name | lmtr-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lmtr | ||||||||
| Allele (12) | |||||||||
| Strain | WBStrain00002457 | ||||||||
| WBStrain00036962 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5172 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Predicted to contribute to guanyl-nucleotide exchange factor activity and molecular adaptor activity. Predicted to be involved in several processes, including cellular response to amino acid stimulus; positive regulation of TOR signaling; and regulation of cell growth. Predicted to be part of Ragulator complex. Is an ortholog of human LAMTOR2 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y97E10AR.7 | |||||||
| Corresponding_transcript | Y97E10AR.7.1 | ||||||||
| Other_sequence | CBC01500_1 | ||||||||
| CR09591 | |||||||||
| Dviv_isotig22349 | |||||||||
| Acan_isotig15063 | |||||||||
| EX014168.1 | |||||||||
| CR09592 | |||||||||
| CRC07517_1 | |||||||||
| HBC11890_1 | |||||||||
| Dviv_isotig22350 | |||||||||
| Associated_feature | WBsf034308 | ||||||||
| WBsf977459 | |||||||||
| WBsf977460 | |||||||||
| WBsf977461 | |||||||||
| WBsf234015 | |||||||||
| WBsf234016 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037930 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058684 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7142 | ||||||||
| Expr13440 | |||||||||
| Expr1020133 | |||||||||
| Expr1039894 | |||||||||
| Expr1162104 | |||||||||
| Expr2013237 | |||||||||
| Expr2031468 | |||||||||
| Drives_construct | WBCnstr00003054 | ||||||||
| WBCnstr00024251 | |||||||||
| Construct_product | WBCnstr00024251 | ||||||||
| WBCnstr00039534 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000031985 | ||||||||
| WBInteraction000032400 | |||||||||
| WBInteraction000384398 | |||||||||
| WBInteraction000513956 | |||||||||
| WBInteraction000513958 | |||||||||
| WBInteraction000559705 | |||||||||
| WBInteraction000566011 | |||||||||
| Map_info | Map | V | Position | 1.00098 | |||||
| Positive | Positive_clone | Y97E10AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064980 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
