WormBase Tree Display for Gene: WBGene00022453
expand all nodes | collapse all nodes | view schema
| WBGene00022453 | SMap | S_parent | Sequence | Y110A2AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ncap-1 | Person_evidence | WBPerson6644 | |||||
| Sequence_name | Y110A2AR.3 | ||||||||
| Molecular_name | Y110A2AR.3a | ||||||||
| Y110A2AR.3a.1 | |||||||||
| CE25196 | |||||||||
| Y110A2AR.3b | |||||||||
| CE33475 | |||||||||
| Y110A2AR.3b.1 | |||||||||
| Y110A2AR.3b.2 | |||||||||
| Other_name | CELE_Y110A2AR.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ncap-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Feb 2017 11:35:01 | WBPerson2970 | Name_change | CGC_name | ncap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncap | ||||||||
| Allele (89) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023338 | ||||||||
| 00023339 | |||||||||
| 00126552 | |||||||||
| 00126553 | |||||||||
| Contained_in_operon | CEOP2076 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Predicted to be part of clathrin vesicle coat. Expressed in nerve ring. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 21. Is an ortholog of human NECAP1 (NECAP endocytosis associated 1) and NECAP2 (NECAP endocytosis associated 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24539) | ||||
| Molecular_info | Corresponding_CDS | Y110A2AR.3a | |||||||
| Y110A2AR.3b | |||||||||
| Corresponding_transcript | Y110A2AR.3a.1 | ||||||||
| Y110A2AR.3b.1 | |||||||||
| Y110A2AR.3b.2 | |||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf649950 | ||||||||
| WBsf665416 | |||||||||
| WBsf987096 | |||||||||
| WBsf987097 | |||||||||
| WBsf987098 | |||||||||
| WBsf1011792 | |||||||||
| WBsf1011793 | |||||||||
| WBsf222815 | |||||||||
| WBsf222816 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019860 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055310 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036547 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098504 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13721 | ||||||||
| Expr1013410 | |||||||||
| Expr1039918 | |||||||||
| Expr1158849 | |||||||||
| Expr2013902 | |||||||||
| Expr2032142 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction | WBInteraction000387975 | ||||||||
| WBInteraction000388159 | |||||||||
| WBInteraction000388219 | |||||||||
| WBInteraction000388361 | |||||||||
| WBInteraction000388362 | |||||||||
| WBInteraction000576328 | |||||||||
| WBInteraction000584307 | |||||||||
| Map_info | Map | II | Position | -9.33643 | |||||
| Positive | Positive_clone | Y110A2AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00053622 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057834 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
