WormBase Tree Display for Gene: WBGene00022471
expand all nodes | collapse all nodes | view schema
| WBGene00022471 | SMap | S_parent | Sequence | Y119C1B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rnf-145 | Person_evidence | WBPerson7514 | |||||
| Sequence_name | Y119C1B.5 | ||||||||
| Molecular_name | Y119C1B.5 | ||||||||
| Y119C1B.5.1 | |||||||||
| CE46955 | |||||||||
| Other_name | CELE_Y119C1B.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | rnf-145 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Jun 2018 11:44:56 | WBPerson1983 | Name_change | CGC_name | rnf-145 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rnf | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00003286 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP1947 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00004768 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009164 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable transferase activity and zinc ion binding activity. Located in cis-Golgi network and trans-Golgi network. Is an ortholog of human RNF145 (ring finger protein 145). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y119C1B.5 | |||||||
| Corresponding_CDS_history | Y119C1B.5:wp229 | ||||||||
| Corresponding_transcript | Y119C1B.5.1 | ||||||||
| Other_sequence | EX554073.1 | ||||||||
| Dviv_isotig23300 | |||||||||
| ACC21495_1 | |||||||||
| EX558259.1 | |||||||||
| ACC41318_1 | |||||||||
| FC541713.1 | |||||||||
| Associated_feature | WBsf649102 | ||||||||
| WBsf649103 | |||||||||
| WBsf717485 | |||||||||
| WBsf983421 | |||||||||
| WBsf1009670 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055496 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055497 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055495 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117129 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram886 | ||||||||
| Expr6894 | |||||||||
| Expr15553 | |||||||||
| Expr15554 | |||||||||
| Expr1013823 | |||||||||
| Expr1039932 | |||||||||
| Expr1159002 | |||||||||
| Expr2007074 | |||||||||
| Expr2025302 | |||||||||
| Drives_construct | WBCnstr00003757 | ||||||||
| WBCnstr00042398 | |||||||||
| Construct_product | WBCnstr00042398 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction | WBInteraction000029986 | ||||||||
| WBInteraction000307838 | |||||||||
| WBInteraction000307843 | |||||||||
| WBInteraction000369073 | |||||||||
| WBInteraction000369074 | |||||||||
| WBInteraction000464512 | |||||||||
| Map_info | Map | I | Position | -1.14313 | |||||
| Positive | Positive_clone | Y119C1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060800 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
