WormBase Tree Display for Gene: WBGene00022476
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| WBGene00022476 | SMap | S_parent | Sequence | Y119D3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-75 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y119D3A.1 | ||||||||
| Molecular_name | Y119D3A.1 | ||||||||
| Y119D3A.1.1 | |||||||||
| CE27454 | |||||||||
| Other_name | CELE_Y119D3A.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-75 | ||||||||
| DB_info | Database | AceView | gene | 3C391 | |||||
| WormQTL | gene | WBGene00022476 | |||||||
| WormFlux | gene | WBGene00022476 | |||||||
| NDB | locus_tag | CELE_Y119D3A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022476|UniProtKB=Q966E2 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 191032 | |||||||
| RefSeq | protein | NM_064976.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q966E2 | |||||||
| UniProt_GCRP | UniProtAcc | Q966E2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-75 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIII_pilon.g6928 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Enriched in RIH; cephalic sheath cell; dopaminergic neurons; hyp1; and hyp2 based on tiling array and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; nanoparticle; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y119D3A.1 | |||||||
| Corresponding_transcript | Y119D3A.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00055501 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011477 | ||||||||
| Expr1159006 | |||||||||
| Expr2011573 | |||||||||
| Expr2029813 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction | WBInteraction000567000 | ||||||||
| Map_info | Map | III | Position | -22.4432 | Error | 0.011111 | |||
| Positive | Positive_clone | Y119D3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00059442 | ||||||||
| WBPaper00061168 | |||||||||
| WBPaper00061319 | |||||||||
| WBPaper00062289 | |||||||||
| WBPaper00062345 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
