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WormBase Tree Display for Gene: WBGene00022482

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Name Class

WBGene00022482SMapS_parentSequenceY119D3B
IdentityVersion2
NameCGC_namefbxa-208Person_evidenceWBPerson655
Sequence_nameY119D3B.4
Molecular_nameY119D3B.4
Y119D3B.4.1
CE27462
Other_nameCELE_Y119D3B.4Accession_evidenceNDBBX284603
Public_namefbxa-208
DB_infoDatabaseAceViewgene3C347
WormQTLgeneWBGene00022482
WormFluxgeneWBGene00022482
NDBlocus_tagCELE_Y119D3B.4
PanthergeneCAEEL|WormBase=WBGene00022482|UniProtKB=Q95Y61
familyPTHR23015
NCBIgene191038
RefSeqproteinNM_064958.2
TrEMBLUniProtAccQ95Y61
UniProt_GCRPUniProtAccQ95Y61
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:05WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
201 Mar 2007 11:55:19WBPerson2970Name_changeCGC_namefbxa-208
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxa
Allele (43)
RNASeq_FPKM (74)
OrthologchrIII_pilon.g6907Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (211)
Structured_descriptionAutomated_descriptionIs affected by several genes including daf-16; dpy-10; and dcr-1 based on microarray and RNA-seq studies. Is affected by six chemicals including silicon dioxide nanoparticle; Cry5B; and Hydrolyzable Tannins based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY119D3B.4
Corresponding_transcriptY119D3B.4.1
Associated_featureWBsf991262
WBsf1014206
WBsf224442
Experimental_infoRNAi_result (15)
Expr_patternExpr1016038
Expr1159023
Drives_constructWBCnstr00024211
Construct_productWBCnstr00024211
Microarray_results (11)
Expression_cluster (48)
Map_infoMapIIIPosition-22.5747
PositivePositive_cloneY119D3BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5747)
[200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5753)
MethodGene