WormBase Tree Display for Gene: WBGene00022653
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| WBGene00022653 | SMap | S_parent | Sequence | ZK105 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK105.1 | |||||||
| Molecular_name | ZK105.1 | ||||||||
| ZK105.1.1 | |||||||||
| CE27646 | |||||||||
| Other_name | ZK105.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| ZK105.f | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_ZK105.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | ZK105.1 | ||||||||
| DB_info | Database | AceView | gene | 5I195 | |||||
| WormQTL | gene | WBGene00022653 | |||||||
| WormFlux | gene | WBGene00022653 | |||||||
| NDB | locus_tag | CELE_ZK105.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022653|UniProtKB=Q965Z4 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 191220 | |||||||
| RefSeq | protein | NM_072596.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318149 | |||||||
| TrEMBL | UniProtAcc | Q965Z4 | |||||||
| UniProt_GCRP | UniProtAcc | Q965Z4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog (90) | |||||||||
| Structured_description | Automated_description | Enriched in RIH; body wall musculature; and muscle cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-three chemicals including Heme; Ethanol; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Uncharacterised protein family UPF0376; Domain of unknown function DUF19; and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK105.1 | |||||||
| Corresponding_transcript | ZK105.1.1 | ||||||||
| Associated_feature | WBsf232002 | ||||||||
| WBsf232003 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059059 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021785 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059058 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027210 | ||||||||
| Expr1162490 | |||||||||
| Expr2008679 | |||||||||
| Expr2026913 | |||||||||
| Drives_construct | WBCnstr00024078 | ||||||||
| Construct_product | WBCnstr00024078 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (239) | |||||||||
| Interaction | WBInteraction000560881 | ||||||||
| WBInteraction000569032 | |||||||||
| WBInteraction000571601 | |||||||||
| Map_info | Positive | Positive_clone | ZK105 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.853915 | |||||||
| Reference | WBPaper00061547 | ||||||||
| Method | Gene |
