WormBase Tree Display for Gene: WBGene00022832
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| WBGene00022832 | SMap | S_parent | Sequence | ZK973 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pdp-1 | Person_evidence | WBPerson657 | |||||
| WBPerson9084 | |||||||||
| Sequence_name | ZK973.3 | ||||||||
| Molecular_name | ZK973.3 | ||||||||
| ZK973.3.1 | |||||||||
| CE24749 | |||||||||
| Other_name | CELE_ZK973.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pdp-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Feb 2009 16:56:38 | WBPerson2970 | Name_change | CGC_name | pdp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pdp | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00094735 | ||||||||
| 00094736 | |||||||||
| 00094737 | |||||||||
| 00094738 | |||||||||
| 00094739 | |||||||||
| 00126811 | |||||||||
| 00126812 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00001412 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006460 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009354 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011953 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00016580 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018362 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006524 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable [pyruvate dehydrogenase (lipoamide)] phosphatase activity. Predicted to be located in mitochondrion. Expressed in head muscle; head neurons; intestine; and tail neurons. Human ortholog(s) of this gene implicated in obesity and pyruvate decarboxylase deficiency. Is an ortholog of human PDP1 (pyruvate dehydrogenase phosphatase catalytic subunit 1) and PDP2 (pyruvate dehydrogenase phosphatase catalytic subunit 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9279) | ||||
| DOID:3649 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9279) | ||||||
| Molecular_info | Corresponding_CDS | ZK973.3 | |||||||
| Corresponding_transcript | ZK973.3.1 | ||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf643213 | ||||||||
| WBsf656203 | |||||||||
| WBsf983392 | |||||||||
| WBsf217522 | |||||||||
| WBsf217523 | |||||||||
| WBsf217524 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr16126 | ||||||||
| Expr1019638 | |||||||||
| Expr1040101 | |||||||||
| Expr1163295 | |||||||||
| Expr2014811 | |||||||||
| Expr2033045 | |||||||||
| Drives_construct | WBCnstr00023137 | ||||||||
| WBCnstr00023936 | |||||||||
| WBCnstr00042782 | |||||||||
| Construct_product | WBCnstr00023137 | ||||||||
| WBCnstr00023936 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Map | I | Position | -1.41764 | Error | 0.016208 | |||
| Positive | Positive_clone | ZK973 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038374 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00051088 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
