WormBase Tree Display for Gene: WBGene00023456
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| WBGene00023456 | SMap | S_parent | Sequence | Y23B4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mir-360 | Person_evidence | WBPerson18 | |||||
| Sequence_name | Y23B4A.3 | ||||||||
| Molecular_name | Y23B4A.3 | ||||||||
| Y23B4A.3a | |||||||||
| Y23B4A.3b | |||||||||
| Other_name | cel-mir-360 | Remark | miRBase V21 import | ||||||
| Cel-Mir-2001 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_Y23B4A.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mir-360 | ||||||||
| DB_info | Database | miRBase | acc | MI0000759 | |||||
| MirGeneDB | cel | Cel-Mir-2001 | |||||||
| NDB | locus_tag | CELE_Y23B4A.3 | |||||||
| NCBI | gene | 3565645 | |||||||
| RefSeq | protein | NR_002430.2 | |||||||
| RNAcentral | URSid | URS0000044515 | |||||||
| URS000023CB32 | |||||||||
| URS00004DC316 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 22 Jul 2004 12:42:49 | WBPerson1849 | Event | Created | |||
| 2 | 26 Jul 2004 10:58:45 | WBPerson1971 | Name_change | CGC_name | mir-360 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01815658 | ||||||||
| WBVar00090885 | |||||||||
| WBVar01500133 | |||||||||
| WBVar01150727 | |||||||||
| WBVar01500067 | |||||||||
| Strain | WBStrain00027502 | ||||||||
| In_cluster | MIR-2001 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-360 encodes a microRNA, a small non-protein coding RNA and seems to be conserved in C. briggsae; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-360 is unknown. | Paper_evidence | WBPaper00024441 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 28 Feb 2005 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including prg-1; alg-1; and alg-2 based on RNA-seq studies. Is affected by multi-walled carbon nanotube and graphene oxide based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | Y23B4A.3 | |||||||
| Y23B4A.3a | |||||||||
| Y23B4A.3b | |||||||||
| Associated_feature | WBsf1005429 | ||||||||
| WBsf1005430 | |||||||||
| Experimental_info | Expr_pattern | Expr8449 | |||||||
| Drives_construct | WBCnstr00005539 | ||||||||
| Expression_cluster (16) | |||||||||
| Map_info | Map | X | Position | -4.07224 | Error | 0.013376 | |||
| Positive | Positive_clone | Y23B4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024441 | ||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032329 | |||||||||
| WBPaper00048786 | |||||||||
| WBPaper00048999 | |||||||||
| WBPaper00050386 | |||||||||
| WBPaper00058668 | |||||||||
| WBPaper00064375 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
