WormBase Tree Display for Gene: WBGene00023497

WBGene00023497 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 2
    Name: CGC_name: lin-15B Person_evidence: WBPerson261
      Sequence_name: ZK662.4
      Molecular_name: ZK662.4
        ZK662.4.1
        CE15381
        ZK662.4.2
      Other_name: lin-15 CGC_data_submission
        CELE_ZK662.4 Accession_evidence: NDB BX284606
      Public_name: lin-15B
    DB_info: Database: AceView gene XQ349
        WormQTL gene WBGene00023497
        WormFlux gene WBGene00023497
        NDB locus_tag CELE_ZK662.4
        Panther gene CAEEL|WormBase=WBGene00023497|UniProtKB=Q27395
          family PTHR22716
        NCBI gene 181662
        RefSeq protein NM_078186.7
        SwissProt UniProtAcc Q27395
        TREEFAM TREEFAM_ID TF317492
        UniProt_GCRP UniProtAcc Q27395
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 24 Aug 2004 15:59:57 WBPerson1971 Event: Split_from: WBGene00003004
      Split_from: WBGene00003004
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: ZK662.4
    Corresponding_transcript: ZK662.4.1
      ZK662.4.2
    Other_sequence: CRC03203_1
      CR11978
      CRC01656_1
      CBC11973_1
      CR03100
      CRC10613_1
      CR04582
    Associated_feature: WBsf978574
      WBsf1008320
      WBsf1008321
      WBsf1008322
      WBsf1008323
      WBsf1024643
      WBsf1024644
      WBsf236808
    Gene_product_binds (4674)
    Transcription_factor: WBTranscriptionFactor000008
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr11544
      Expr13120
      Expr13667
      Expr1011641
      Expr1040140
      Expr1163030
      Expr1200043
      Expr2013162
      Expr2031394
    Drives_construct: WBCnstr00007736
      WBCnstr00023855
    Construct_product: WBCnstr00007736
      WBCnstr00016646
      WBCnstr00019445
      WBCnstr00019587
      WBCnstr00019645
      WBCnstr00020631
      WBCnstr00021930
      WBCnstr00023855
    Regulate_expr_cluster: WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00062056:lin-15B(n744)_downregulated
      WBPaper00062056:lin-15B(n744)_upregulated
      WBPaper00062056:lin-15B(we23)_downregulated
      WBPaper00062056:lin-15B(we23)_upregulated
    Microarray_results (19)
    Expression_cluster: WBPaper00005432:xbp-1(zc12)_downregulated
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032425:up_in_lin-35
      WBPaper00032976:non_compensated_genes
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00040209:B.thuringiensis_downregulated_MY15
      WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
      WBPaper00044736:flat_dev_expression
      WBPaper00045618:puf-8_downregulated
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00046509:lin-35(n745)_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050094:glp-1(gf)_upregulated
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050094:mes-6(bn66)_upregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F1_hrde-1(tm1200)_upregulated
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051305:vit-2(ac3)_upregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053321:lin-15B(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_20C_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056039:hda-6(ok3203)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056161:hermaphrodite_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056855:his-72(uge40)_upregulated
      WBPaper00057162:meg-3_meg-4_downregulated_sRNA
      WBPaper00058691:set-2(bn129)_downregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059598:HeatShock_upregulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00059754:C.neoformans_H99_upregulated
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060951:mrpl-2(osa3)_upregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061274:microgravity_upregulated
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061478:pie-1(ne4433)_upregulated
      WBPaper00061479:hda-1(ne4748)_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:R07E4.5-skp-1_1608
      WBPaper00061651:ADF_enriched
      WBPaper00061651:AIN_enriched
      WBPaper00061651:CAN_enriched
      WBPaper00061651:DA_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DB_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:I1_enriched
      WBPaper00061651:NSM_enriched
      WBPaper00061651:VA12_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB_enriched
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00064005:starvation_downregulated_N2_protein
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065074:glna(-)_upregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065149:lin-52(n771)_upregulated
      WBPaper00065158:25C_vs_15C_upregulated_WholeAnimal
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066085:hda-3(ok1991)_upregulated
      WBPaper00066085:sin-3(syb2172)_upregulated
      WBPaper00066110:Doxorubicin_downregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_9
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00024671:AFD_vs_AWB_upregulated
      WBPaper00025032:cluster_22
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00032165:differentially_expressed_with_age_medoid_1
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_F
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048567:dnj-14_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00056330:mrps-5(RNAi)_downregulated
      [cgc5767]:cluster_17
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(122_min)
      [cgc5767]:expression_class_E_pi(41_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    Interaction (314)
  Map_info: Map: X Position: 22.9454 Error: 0.00114
    Well_ordered
    Positive: Positive_clone: PS#74B3
        ZK662 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 4458
        4457
        6060
        7015
        7082
      Multi_point: 4524
      Pos_neg_data: 4461
        491
        518
        519
        536
  Reference (328)
  Remark: To properly reflect that this locus encodes two distinct products, this gene was created from the former lin-15 gene on the advice of the CGC. [krb 040824]
  Method: Gene