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WormBase Tree Display for Gene: WBGene00023727

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Name Class

WBGene00023727SMapS_parentSequencecb25.fpc0006a
IdentityVersion2
NameCGC_nameCbr-del-4From_analysisInferred_from_orthology
Sequence_nameCBG00319
Molecular_nameCBG00319
CBG00319.1
CBP43838
Other_nameCBG_00319Accession_evidenceNDBHE600987
Public_nameCbr-del-4
DB_infoDatabaseNDBlocus_tagCBG_00319
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-del-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdel
RNASeq_FPKMWBls:00000020.16679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.3733From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.58172From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.3714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.41785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.999785From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.13444From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.019067From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.038133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.012711From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.060746From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.121492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.140031From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.155099From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.250136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.263837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.494209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.499389From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.00681From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.02682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.20002From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.23027From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.90066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.88144From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.7056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.829008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.984124From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.13924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.36326From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.77918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.200348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.223167From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.315386From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.407605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.59386From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.54432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.975963From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.18526From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.97249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.76361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.025958From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.129791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.136017From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.686309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.494209From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.04884From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.45603From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.02135From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127074
00127075
00127076
Ortholog (31)
Paralog (27)
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00319
Corresponding_CDS_historyCBG00319:bp194
CBG00319:bp255
Corresponding_transcriptCBG00319.1
Other_sequenceOden_isotig27148
Oden_isotig22643
PPC00320_1
Experimental_infoExpr_patternExpr1066274
Microarray_resultsGPL8303_CB6_WBGene00023727_A
GPL8303_CB6_WBGene00023727_B
GPL14143_CBG00319_480-539_0.910_13_C
GPL14143_CBG00319_577-636_0.889_19_B
GPL14143_CBG00319_1066-1125_0.932_5_A
MethodGene