WormBase Tree Display for Gene: WBGene00024207

WBGene00024207 SMap: S_parent: Sequence: cb25.fpc0022b
  Identity: Version: 2
    Name: CGC_name: Cbr-cdc-25.4 From_analysis: Inferred_from_orthology
      Sequence_name: CBG00890
      Molecular_name: CBG00890
        CBG00890.1
        CBP48138
      Other_name: CBG_00890 Accession_evidence: NDB HE600951
      Public_name: Cbr-cdc-25.4
    DB_info: Database: NDB locus_tag CBG_00890
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:53 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-cdc-25.4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdc
    RNASeq_FPKM: WBls:0000002 0.496076 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.502886 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.791344 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.37507 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.397 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.499481 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.692758 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.032128 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.160638 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 0.3654 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0 From_analysis (11)
      WBls:0000027 0 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
            RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.042923 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.171693 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.141503 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.252839 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.324481 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.364175 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.792245 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 10.6899 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
            RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
            RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        42.7596 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        17.8118 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        19.2258 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        35.6236 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        36.9714 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 12.8081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        13.8619 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        14.5356 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        14.5802 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        15.5245 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        15.9031 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        13.1908 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        14.2211 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        6.46705 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.10722 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        5.23423 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00127547
      00127548
      00127549
    Ortholog (24)
    Paralog: WBGene00028843 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030028 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033554 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in positive regulation of cell cycle G2/M phase transition. Is an ortholog of C. elegans cdc-25.4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG00890
    Corresponding_CDS_history: CBG00890:bp194
      CBG00890:bp258
    Corresponding_transcript: CBG00890.1
    Other_sequence (14)
  Experimental_info: Expr_pattern: Expr1062964
    Microarray_results: GPL8303_CB6_WBGene00024207_A
      GPL14143_CBG00890_324-383_0.878_5_B
      GPL14143_CBG00890_460-519_0.856_12_A
      GPL14143_CBG00890_584-643_0.895_1_C
    Expression_cluster: WBPaper00058955:heatshock_upregulated_CBG
  Method: Gene