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WormBase Tree Display for Gene: WBGene00024219

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Name Class

WBGene00024219SMapS_parentSequencecb25.fpc0022b
IdentityVersion3
NameSequence_nameCBG00904
Molecular_nameCBG00904
CBG00904.1
CBP27166
Other_nameCBG_00904Accession_evidenceNDBHE600951
Public_nameCBG00904
DB_infoDatabaseNDBlocus_tagCBG_00904
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ergo-1.1
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000210.1866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
38.7855From_analysisRNASeq.briggsae.WBls:0000002.control_mean
46.3347From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
59.8353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
45.0107From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.085From_analysisRNASeq.briggsae.WBls:0000002.control_median
63.686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003481.928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
488.941From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
495.955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
483.87From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
487.251From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004185.536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
186.614From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
187.692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
169.237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
184.959From_analysisRNASeq.briggsae.WBls:0000004.control_mean
190.823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
191.509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.2038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.78558From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.18861From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.96433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.96962From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.35519From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.52176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003510.3939From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.09033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.72998From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.26779From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.80559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.50812From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.40656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041114.129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
115.814From_analysisRNASeq.briggsae.WBls:0000041.control_median
117.5From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
123.97From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.74708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
90.8365From_analysisRNASeq.briggsae.WBls:0000041.control_mean
19.4313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
65.3709From_analysisRNASeq.briggsae.WBls:0000041.control_mean
66.7802From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.4481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006320.1434From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
21.1036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
22.1048From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.5943From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
22.7368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
23.946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.6656From_analysisRNASeq.briggsae.WBls:0000063.control_median
25.2851From_analysisRNASeq.briggsae.WBls:0000063.control_mean
41.1865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.8927From_analysisRNASeq.briggsae.total_over_all_stages.control_median
69.259From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
20.6235From_analysisRNASeq.briggsae.total_over_all_stages.control_median
83.7428From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127558
00127559
Ortholog (72)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans ergo-1. In C. elegans, ergo-1 is involved in regulatory ncRNA-mediated post-transcriptional gene silencing and siRNA processing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00904
Corresponding_CDS_historyCBG00904:bp194
Corresponding_transcriptCBG00904.1
Other_sequenceCR03683
CBC15551_1
Experimental_infoExpr_patternExpr1057434
Microarray_resultsGPL8303_CB6_WBGene00024219_A
GPL8303_CB6_WBGene00024219_B
GPL14143_CBG00904_3090-3149_0.766_63_A
GPL14143_CBG00904_3168-3227_0.566_358_C
GPL14143_CBG00904_3383-3442_0.779_31_B
Remark[180319 gw3] The CGC name Cbr-ergo-1.1 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00036168Curator_confirmedWBPerson4025
MethodGene