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WormBase Tree Display for Gene: WBGene00024221

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Name Class

WBGene00024221SMapS_parentSequencecb25.fpc0022b
IdentityVersion2
NameCGC_nameCbr-znfx-1From_analysisInferred_from_orthology
Sequence_nameCBG00906
Molecular_nameCBG00906
CBG00906.1
CBP47498
Other_nameCBG_00906Accession_evidenceNDBHE600951
Public_nameCbr-znfx-1
DB_infoDatabaseNDBlocus_tagCBG_00906
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
208 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCbr-znfx-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classznfx
Allele (14)
RNASeq_FPKMWBls:00000022.75119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.6776From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.60476From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9.67685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.7105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.18583From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.64081From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000035.29725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
6.15953From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.02182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
10.8081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
7.70906From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.05659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.33804From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.6195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
3.60419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
3.64133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
3.7119From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.63791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.49433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.23564From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.82465From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.38793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.64991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.0892From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.23728From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000354.48709From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000383.71474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.5271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.01604From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.29411From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.06112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.76119From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004121.6234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
21.9455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
22.1171From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.2887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
22.323From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.4344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
13.2818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
20.6235From_analysisRNASeq.briggsae.WBls:0000041.control_mean
21.1671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
21.7845From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006319.6496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
19.894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
19.9361From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
21.3553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
22.0195From_analysisRNASeq.briggsae.WBls:0000063.control_mean
29.2624From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
11.9498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
19.9151From_analysisRNASeq.briggsae.WBls:0000063.control_median
20.3412From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010110.0951From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6.38793From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.70487From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.95285From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127560
Ortholog (11)
Paralog (15)
Structured_descriptionAutomated_descriptionPredicted to enable helicase activity. Is an ortholog of C. elegans znfx-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00906
Corresponding_CDS_historyCBG00906:bp256
Corresponding_transcriptCBG00906.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1062611
Microarray_resultsGPL8303_CB6_WBGene00024221_A
GPL8303_CB6_WBGene00024221_B
GPL14143_CBG00906_1380-1439_0.649_468_B
GPL14143_CBG00906_2841-2900_0.805_2_C
GPL14143_CBG00906_2978-3037_0.809_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene