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WormBase Tree Display for Gene: WBGene00024264

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Name Class

WBGene00024264SMapS_parentSequencecb25.fpc0022b
IdentityVersion3
NameSequence_nameCBG00960
Molecular_nameCBG00960
CBG00960.1
CBP13970
Other_nameCBG_00960Accession_evidenceNDBHE600951
Cbr-tag-124
Public_nameCBG00960
DB_infoDatabaseNDBlocus_tagCBG_00960
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tag-124
303 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000210.581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
11.5615From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.0165From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.0871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.8242From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11.2987From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.61231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000333.9915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
35.8063From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
37.6211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
35.964From_analysisRNASeq.briggsae.WBls:0000003.control_mean
36.2795From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000420.2828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
20.5833From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
20.8837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
17.5459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
20.2633From_analysisRNASeq.briggsae.WBls:0000004.control_mean
21.0372From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
21.5668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.465995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.29158From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.68265From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.29038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.63278From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.79098From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.48318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.88959From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.394From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.14272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.79392From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.03501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.31948From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.60394From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004119.4959From_analysisRNASeq.briggsae.WBls:0000041.control_mean
21.2534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
22.4638From_analysisRNASeq.briggsae.WBls:0000041.control_median
23.6741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
24.6788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.37722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
12.0317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
16.6415From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.6425From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.83373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.6153From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.0848From_analysisRNASeq.briggsae.WBls:0000063.control_mean
11.2949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
14.467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.32597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.72059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
10.9551From_analysisRNASeq.briggsae.WBls:0000063.control_median
11.4542From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.3016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.0984From_analysisRNASeq.briggsae.total_over_all_stages.control_median
12.1411From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.4875From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.1259From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127598
00127599
00127600
00127601
Ortholog (31)
ParalogWBGene00027917Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042138Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity and pseudouridine synthase activity. Predicted to be involved in pseudouridine synthesis. Is an ortholog of C. elegans tag-124.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00960
Corresponding_CDS_historyCBG00960:bp194
Corresponding_transcriptCBG00960.1
Other_sequence (15)
Experimental_infoExpr_patternExpr1055111
Microarray_resultsGPL8303_CB6_WBGene00024264_A
GPL8303_CB6_WBGene00024264_B
GPL14143_CBG00960_61-120_0.725_46_B
GPL14143_CBG00960_93-152_0.724_47_A
GPL14143_CBG00960_1044-1103_0.854_1_C
MethodGene