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WormBase Tree Display for Gene: WBGene00024348

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Name Class

WBGene00024348SMapS_parentSequencecb25.fpc0022b
IdentityVersion2
NameCGC_nameCbr-taf-8From_analysisInferred_from_orthology
Sequence_nameCBG01057
Molecular_nameCBG01057
CBG01057.1
CBP43107
Other_nameCBG_01057Accession_evidenceNDBHE600951
Public_nameCbr-taf-8
DB_infoDatabaseNDBlocus_tagCBG_01057
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-taf-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtaf
RNASeq_FPKMWBls:000000213.3751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
17.2575From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.9625From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.5913From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.5927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
18.7776From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000358.5233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
58.7105From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
58.8977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
60.13From_analysisRNASeq.briggsae.WBls:0000003.control_mean
62.9691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000441.9042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
42.8626From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
43.821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
37.4115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
39.8222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
41.7885From_analysisRNASeq.briggsae.WBls:0000004.control_mean
45.9838From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.31874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.4637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.55542From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.44595From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.95801From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.67462From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.36061From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.2894From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.5542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.8927From_analysisRNASeq.briggsae.WBls:0000038.control_mean
22.4074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.62567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.98355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.26888From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004123.5827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
35.8036From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.5249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
38.6237From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.7225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.3843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
29.7209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
34.8054From_analysisRNASeq.briggsae.WBls:0000041.control_mean
35.8972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
36.211From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006318.4697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
19.9466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
21.2919From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
23.0436From_analysisRNASeq.briggsae.WBls:0000063.control_mean
23.7919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
31.7179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.6862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
20.989From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.6507From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010118.9625From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.2355From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
20.3164From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.0072From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127686
00127687
Contained_in_operonCBOPA0051
Ortholog (25)
Structured_descriptionAutomated_descriptionPredicted to enable protein heterodimerization activity. Predicted to be part of transcription factor TFIID complex. Is an ortholog of C. elegans taf-8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01057
Corresponding_CDS_historyCBG01057:bp194
CBG01057:bp255
Corresponding_transcriptCBG01057.1
Experimental_infoExpr_patternExpr1065675
Microarray_resultsGPL8303_CB6_WBGene00024348_A
GPL8303_CB6_WBGene00024348_B
GPL14143_CBG01057_208-267_0.800_8_C
GPL14143_CBG01057_480-539_0.797_10_A
GPL14143_CBG01057_538-597_0.765_39_B
MethodGene