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WormBase Tree Display for Gene: WBGene00024493

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Name Class

WBGene00024493SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameSequence_nameCBG01227
Molecular_nameCBG01227
CBG01227.1
CBP49289
Other_nameCBG_01227Accession_evidenceNDBHE601256
Public_nameCBG01227
DB_infoDatabaseNDBlocus_tagCBG_01227
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
212 Jun 2018 17:25:10WBPerson4025EventSplit_intoWBGene00303278
Split_intoWBGene00303278
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.05602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.09748From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.62115From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.70996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.77829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.93789From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.16044From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.179674From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.359348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.269784From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.450004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.172194From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.232528From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.298316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.330126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.098106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.116429From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.50146From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.28984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.424571From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.732712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.05927From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000352.04573From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.600947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
10.937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.1742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.8067From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.43921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.78784From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000411.0749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.32546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.48833From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.57802From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.6512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.26053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.95587From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.51411From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.06356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.70899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.15476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.54091From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.63733From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.18405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.72843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.57639From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.69553From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.75374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.99522From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.3137From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.71475From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.16962From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127792
00127793
00127794
00127795
Ortholog (17)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-115 and nhr-226. In C. elegans, nhr-115 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01227
Corresponding_CDS_historyCBG01227:bp194
CBG01227:bp266
Corresponding_transcriptCBG01227.1
Other_sequenceCBC10509_1
FD516872.1
CSC01557_1
Experimental_infoExpr_patternExpr1055966
Microarray_resultsGPL8303_CB6_WBGene00024493_A
GPL8303_CB6_WBGene00024493_B
GPL14143_CBG01227_1816-1875_0.889_12_C
GPL14143_CBG01227_2282-2341_0.901_8_B
GPL14143_CBG01227_2503-2562_0.943_1_A
MethodGene