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WormBase Tree Display for Gene: WBGene00024498

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Name Class

WBGene00024498SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-nhr-275From_analysisInferred_from_orthology
Sequence_nameCBG01233
Molecular_nameCBG01233
CBG01233.1
CBP05947
Other_nameCBG_01233Accession_evidenceNDBHE601256
Public_nameCbr-nhr-275
DB_infoDatabaseNDBlocus_tagCBG_01233
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:51WBPerson2970Name_changeCGC_nameCbr-nhr-275
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000021.55735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.08513From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.70179From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.46288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.69217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.88865From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.44938From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
3.65752From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
4.32403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
4.8241From_analysisRNASeq.briggsae.WBls:0000003.control_mean
7.15727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000046.66921From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
6.88431From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.09941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.06955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
6.07473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.53848From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.77949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.097499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.462847From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.4154From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.68584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.08099From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.69913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.23633From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.49096From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.149311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.33368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.09668From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.2936From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.25352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.65021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.86242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.08863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.21944From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.35025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.47276From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.58976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.93116From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.97001From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.60951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.08642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.391666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.10352From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.30887From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.21505From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.24278From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.45544From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.93907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.21505From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.86413From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.67062From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.21493From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127800
00127801
00127802
00127803
Ortholog (53)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-275.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01233
Corresponding_CDS_historyCBG01233:bp194
Corresponding_transcriptCBG01233.1
Other_sequenceCRC08043_1
CR06239
CBC07202_1
Experimental_infoExpr_patternExpr1062134
Microarray_resultsGPL8303_CB6_WBGene00024498_A
GPL14143_CBG01233_646-705_0.897_25_C
GPL14143_CBG01233_988-1047_0.927_8_B
GPL14143_CBG01233_1212-1271_0.909_16_A
MethodGene