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WormBase Tree Display for Gene: WBGene00024504

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Name Class

WBGene00024504SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-nhr-134From_analysisInferred_from_orthology
Sequence_nameCBG01240
Molecular_nameCBG01240
CBG01240.1
CBP42057
Other_nameCBG_01240Accession_evidenceNDBHE601256
Public_nameCbr-nhr-134
DB_infoDatabaseNDBlocus_tagCBG_01240
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-134
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000023.51327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.017From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.16727From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.97154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.89375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.76514From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.59889From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.389495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.667973From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.94645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.776734From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.994256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.79308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.53212From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.27117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.29657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
3.94714From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.1963From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.67356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.387347From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.435397From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.50583From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.69475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.40708From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.97406From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.37876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.95521From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.666443From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.08707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.45418From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.51762From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.94817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
8.11503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000412.25085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.69882From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.81067From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.92253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.70848From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.96172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
16.4291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.44212From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.50226From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.75053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.927From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.98887From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.29664From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.30759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.41312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.30211From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.3201From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.97625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.79308From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.95999From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.85781From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.32051From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127820
00127821
00127822
00127823
Contained_in_operonCBOPA0533
Ortholog (38)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-134.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01240
Corresponding_CDS_historyCBG01240:bp194
CBG01240:bp255
Corresponding_transcriptCBG01240.1
Other_sequenceCBC13912_1
Experimental_infoExpr_patternExpr1068178
Microarray_resultsGPL8303_CB6_WBGene00024504_A
GPL8303_CB6_WBGene00024504_B
GPL14143_CBG01240_718-777_0.854_77_C
GPL14143_CBG01240_959-1018_0.895_38_A
GPL14143_CBG01240_1093-1152_0.794_116_B
MethodGene