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WormBase Tree Display for Gene: WBGene00024509

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Name Class

WBGene00024509SMapS_parentSequencecb25.fpc0023
IdentityVersion1
NameSequence_nameCBG01245
Molecular_nameCBG01245
CBG01245.1
CBP36848
Other_nameCBG_01245Accession_evidenceNDBHE601256
Public_nameCBG01245
DB_infoDatabaseNDBlocus_tagCBG_01245
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.398092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.557049From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.74427From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.27767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.686854From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.762367From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.816659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.424365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.626067From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.827768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.688026From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.811946From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.07193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.62858From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.18523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.8284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.93486From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.07637From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.51237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.044076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.261656From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.305046From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.609407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.435531From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.526097From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.18925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.996117From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.067526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.753953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.788519From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.807846From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.823085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.58682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.667861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.773253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.854239From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.935225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.969695From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.50244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.1923From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.20075From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.46627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.80874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.132016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.244065From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.269641From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.286092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.532578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.277867From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.289716From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.517967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.753953From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.821032From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.819872From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.969419From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127840
00127841
00127842
00127843
00127844
00127845
00127846
00127847
Contained_in_operonCBOPA0058
Ortholog (27)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable several functions, including DNA-binding transcription factor activity; heme binding activity; and transition metal ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-190.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01245
Corresponding_CDS_historyCBG01245:bp194
Corresponding_transcriptCBG01245.1
Other_sequencePPC08759_1
Experimental_infoExpr_patternExpr1050018
Microarray_resultsGPL8303_CB6_WBGene00024507_A
GPL14143_CBG01243_1163-1222_0.794_80_B
MethodGene