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WormBase Tree Display for Gene: WBGene00024522

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Name Class

WBGene00024522SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-nhr-13From_analysisInferred_from_orthology
Sequence_nameCBG01259
Molecular_nameCBG01259a
CBG01259a.1
CBP27440
CBG01259b
CBP14120
CBG01259b.1
Other_nameCBG_01259Accession_evidenceNDBHE601256
Public_nameCbr-nhr-13
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-13
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000023.21939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.51524From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.93647From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.07478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.60413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.05969From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.60338From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000311.718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
17.2554From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
22.7928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.3837From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
16.6315From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000413.5851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
16.6165From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
19.6479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
13.1601From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
13.9086From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
15.9856From_analysisRNASeq.briggsae.WBls:0000004.control_mean
19.6261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.220053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.652586From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.57781From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.8608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.25669From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.45607From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.09084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.77795From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.17898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.52657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.75978From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.8889From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.25122From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.08236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000412.81315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.06615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.13045From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.17212From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.27809From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.36442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.77474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.87946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.97281From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.02934From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.714314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.28149From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.31038From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.73989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.64285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.52514From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.54262From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.84831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.52657From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.21573From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.73247From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.1719From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127876
00127877
00127878
00127879
Ortholog (25)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01259a
CBG01259b
Corresponding_CDS_historyCBG01259:bp194
Corresponding_transcriptCBG01259a.1
CBG01259b.1
Other_sequenceCRC03067_1
CRC10192_1
CBC15711_1
CR03762
CJC17452_1
CR04047
CBC12541_1
Experimental_infoExpr_patternExpr1066610
Microarray_resultsGPL8303_CB6_WBGene00024522_A
GPL8303_CB6_WBGene00024522_B
GPL14143_CBG01259_452-511_0.897_25_C
GPL14143_CBG01259_538-597_0.911_19_B
GPL14143_CBG01259_785-844_0.935_5_A
MethodGene