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WormBase Tree Display for Gene: WBGene00024606

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Name Class

WBGene00024606SMapS_parentSequencecb25.fpc0023
IdentityVersion2
NameCGC_nameCbr-nhr-55From_analysisInferred_from_orthology
Sequence_nameCBG01353
Molecular_nameCBG01353
CBG01353.1
CBP45031
Other_nameCBG_01353Accession_evidenceNDBHE601256
Public_nameCbr-nhr-55
DB_infoDatabaseNDBlocus_tagCBG_01353
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-55
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000022.92541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.41704From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.08617From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.91606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.85238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.17123From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.77772From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.245797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.710928From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.17606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.944449From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.41149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.448202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.2919From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.13559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.648908From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.862523From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.23402From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.07487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.205533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.46321From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.78927From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.69907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
18.8855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.58114From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.06333From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003523.3528From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.236012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.9154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.18899From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.08499From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.08035From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000410.975481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.988012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.31958From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.65115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.67553From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.08748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.31598From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.36931From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.41491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.77887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.68608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.72549From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.87853From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.06106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.0018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.96979From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.3673From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.5763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.13559From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.46181From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.16229From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.20785From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127951
00127952
00127953
00127954
Ortholog (61)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-55.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01353
Corresponding_CDS_historyCBG01353:bp194
CBG01353:bp255
Corresponding_transcriptCBG01353.1
Other_sequenceCRC12055_1
Experimental_infoExpr_patternExpr1053172
Microarray_resultsGPL8303_CB6_WBGene00024606_A
GPL8303_CB6_WBGene00024606_B
GPL14143_CBG01353_226-285_0.914_3_C
GPL14143_CBG01353_311-370_0.930_2_B
GPL14143_CBG01353_601-660_0.978_1_A
MethodGene