WormBase Tree Display for Gene: WBGene00024608

WBGene00024608 SMap: S_parent: Sequence: cb25.fpc0023
  Identity: Version: 3
    Name: Sequence_name: CBG01355
      Molecular_name: CBG01355
        CBG01355.1
        CBP47232
      Other_name: CBG_01355 Accession_evidence: NDB HE601256
      Public_name: CBG01355
    DB_info: Database: NDB locus_tag CBG_01355
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 21 Apr 2008 17:10:51 WBPerson2970 Name_change: CGC_name: Cbr-nhr-98
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00135826
      WBVar00135827
      WBVar00135822
      WBVar00135828
      WBVar00135823
      WBVar00135824
      WBVar00135825
    RNASeq_FPKM: WBls:0000002 2.91145 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        4.12531 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.66712 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        9.9646 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        3.03084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        3.57807 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        5.00805 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.424691 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.838715 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.25274 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.406286 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.694572 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 6.1749 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        7.53178 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        8.88866 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        6.91444 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        7.18677 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        7.46569 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        8.16367 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.529336 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1.57118 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2.56578 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.59684 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.554 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.58401 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        6.51863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 5.76675 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.55433 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        4.28586 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        5.62298 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        6.22428 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.1627 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        8.48905 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 1.02281 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.07482 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.29835 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.52188 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.70644 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.20627 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.96157 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.24771 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.40126 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        4.25924 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 1.66315 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.77664 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.98179 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.26675 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        2.29057 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.05119 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.12427 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        3.9914 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 2.91145 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.33112 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        3.59883 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.43355 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00127955
      00127956
      00127957
      00127958
    Ortholog (69)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-123 and nhr-98. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01355
    Corresponding_CDS_history: CBG01355:bp194
      CBG01355:bp255
    Corresponding_transcript: CBG01355.1
  Experimental_info: Expr_pattern: Expr1062922
    Microarray_results: GPL8303_CB6_WBGene00024608_A
      GPL8303_CB6_WBGene00024608_B
      GPL14143_CBG01355_624-683_0.921_3_C
      GPL14143_CBG01355_782-841_0.916_7_A
      GPL14143_CBG01355_998-1057_0.944_1_B
  Remark: [180319 gw3] The CGC name Cbr-nhr-98 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene