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WormBase Tree Display for Gene: WBGene00024927

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Name Class

WBGene00024927SMapS_parentSequencecb25.fpc0039
IdentityVersion2
NameCGC_nameCbr-cif-1From_analysisInferred_from_orthology
Sequence_nameCBG01738
Molecular_nameCBG01738
CBG01738.1
CBP14243
CBG01738.2
Other_nameCBG_01738Accession_evidenceNDBHE601298
Public_nameCbr-cif-1
DB_infoDatabaseNDBlocus_tagCBG_01738
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cif-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcif
RNASeq_FPKMWBls:000000250.9311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
64.6543From_analysisRNASeq.briggsae.WBls:0000002.control_mean
65.1401From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
77.8917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
52.3168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
58.7285From_analysisRNASeq.briggsae.WBls:0000002.control_median
61.5699From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003104.286From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
124.542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
84.0298From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
103.481From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
104.018From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000488.6822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
90.4704From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
92.2585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
101.048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
90.7311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
91.6304From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
92.87From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002713.6938From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.7775From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.24416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
62.3946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
24.2622From_analysisRNASeq.briggsae.WBls:0000027.control_median
28.7908From_analysisRNASeq.briggsae.WBls:0000027.control_mean
34.8306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003547.0365From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003827.4153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
37.303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
40.8875From_analysisRNASeq.briggsae.WBls:0000038.control_median
44.4719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
52.1308From_analysisRNASeq.briggsae.WBls:0000038.control_mean
99.3329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004162.385From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
80.968From_analysisRNASeq.briggsae.WBls:0000041.control_mean
86.4253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
86.666From_analysisRNASeq.briggsae.WBls:0000041.control_median
86.9067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
88.1552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
69.3106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
79.8361From_analysisRNASeq.briggsae.WBls:0000041.control_mean
85.8336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
86.1294From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063138.482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
79.6515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
81.0455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
82.6479From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
86.6232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
93.69From_analysisRNASeq.briggsae.WBls:0000063.control_mean
64.1531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
81.8467From_analysisRNASeq.briggsae.WBls:0000063.control_median
88.7672From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010167.8601From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
79.6515From_analysisRNASeq.briggsae.total_over_all_stages.control_median
70.0337From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
80.3485From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (26)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Proteasome component (PCI) domain and PCI domain. Is an ortholog of C. elegans cif-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01738
Corresponding_CDS_historyCBG01738:bp194
Corresponding_transcriptCBG01738.1
CBG01738.2
Other_sequence (40)
Experimental_infoExpr_patternExpr1050300
Expr1054238
Microarray_resultsGPL8303_CB6_WBGene00024927_A
GPL8303_CB6_WBGene00024927_B
GPL14143_CBG01738_459-518_0.891_31_C
GPL14143_CBG01738_778-837_0.904_23_B
GPL14143_CBG01738_1013-1072_0.961_2_A
GPL14143_CBG26433_609-668_0.878_57_C
GPL14143_CBG26433_654-713_0.918_25_B
GPL14143_CBG26433_997-1056_0.937_9_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_downregulated
MethodGene