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WormBase Tree Display for Gene: WBGene00025043

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Name Class

WBGene00025043SMapS_parentSequencecb25.fpc0045
IdentityVersion2
NameCGC_nameCbr-nhr-1From_analysisInferred_from_orthology
Sequence_nameCBG01866
Molecular_nameCBG01866a
CBG01866a.1
CBP40913
CBG01866b
CBP44464
CBG01866b.1
Other_nameCBG_01866Accession_evidenceNDBHE601451
Public_nameCbr-nhr-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000214.5058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.0091From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
17.1446From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.9189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.88From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
14.7575From_analysisRNASeq.briggsae.WBls:0000002.control_median
16.0784From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000312.4986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.2786From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
18.0585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
15.4901From_analysisRNASeq.briggsae.WBls:0000003.control_mean
15.9133From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000433.701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
34.7943From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
35.8875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
33.3711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
35.5863From_analysisRNASeq.briggsae.WBls:0000004.control_mean
36.8887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
38.0832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002714.2696From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
20.0298From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.13652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
41.6833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
23.2852From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.6604From_analysisRNASeq.briggsae.WBls:0000027.control_median
33.0512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003525.8006From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.6132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
20.2757From_analysisRNASeq.briggsae.WBls:0000038.control_median
21.0322From_analysisRNASeq.briggsae.WBls:0000038.control_mean
24.9381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
35.9792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.59847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000414.1919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.52546From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.67107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.67463From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.67819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.56068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
12.1893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.61943From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.86791From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.91633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006310.0079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
10.409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.78509From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.97111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.53742From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.93818From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.70362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.25426From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010114.5058From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.974From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.7575From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.9801From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128455
00128456
00128457
00128458
Ortholog (30)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-1. In C. elegans, nhr-1 is involved in regulation of response to osmotic stress.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01866a
CBG01866b
Corresponding_CDS_historyCBG01866:bp194
CBG01866:bp255
Corresponding_transcriptCBG01866a.1
CBG01866b.1
Other_sequence (40)
Experimental_infoExpr_patternExpr1057496
Microarray_resultsGPL8303_CB6_WBGene00025043_A
GPL8303_CB6_WBGene00025043_B
GPL14143_CBG01866_893-952_0.785_22_B
GPL14143_CBG01866_993-1052_0.790_19_C
GPL14143_CBG01866_1170-1229_0.806_13_A
MethodGene