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WormBase Tree Display for Gene: WBGene00025069

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Name Class

WBGene00025069SMapS_parentSequencecb25.fpc0045
IdentityVersion2
NameCGC_nameCbr-dpy-22From_analysisInferred_from_orthology
Sequence_nameCBG01900
Molecular_nameCBG01900
CBG01900.1
CBP45864
Other_nameCBG_01900Accession_evidenceNDBHE601451
Public_nameCbr-dpy-22
DB_infoDatabaseNDBlocus_tagCBG_01900
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-dpy-22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:000000214.6616From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
16.0685From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.4722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
31.0717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
13.6923From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.2321From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000318.92From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
22.7365From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
26.553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
19.1023From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.5251From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000421.2514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
21.375From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.4985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
20.2706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
20.4419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
21.5228From_analysisRNASeq.briggsae.WBls:0000004.control_mean
24.1514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002715.069From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.1041From_analysisRNASeq.briggsae.WBls:0000027.control_mean
22.9348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.30852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.0019From_analysisRNASeq.briggsae.WBls:0000027.control_median
19.6946From_analysisRNASeq.briggsae.WBls:0000027.control_mean
33.4662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003540.7553From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003819.0349From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.0885From_analysisRNASeq.briggsae.WBls:0000038.control_mean
28.7268From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.12325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
39.1609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.34299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.5989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
13.3459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
13.7137From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.0758From_analysisRNASeq.briggsae.WBls:0000041.control_median
14.8058From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.1044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
11.3728From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.9724From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.00093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.38082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.12786From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.66331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.85857From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.00819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.10923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.60035From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.93338From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.96277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010114.8058From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.9796From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.9374From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.9976From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128470
00128471
00128472
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Is an ortholog of C. elegans dpy-22. In C. elegans, dpy-22 is involved in negative regulation of epidermal growth factor receptor signaling pathway and negative regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01900
Corresponding_CDS_historyCBG01900:bp194
CBG01900:bp206
CBG01900:bp255
Corresponding_transcriptCBG01900.1
Other_sequenceOden_isotig24001
MI06771
JI164168.1
CGC00402_1
AM158023.1
MJ02582
MIC05199_1
JI164145.1
CGC00819_1
Experimental_infoExpr_patternExpr1068544
Microarray_resultsGPL8303_CB6_WBGene00025069_A
GPL8303_CB6_WBGene00025069_C
GPL8303_CB6_WBGene00025069_D
GPL8303_CB6_WBGene00025069_E
GPL14143_CBG01900_3674-3733_0.801_64_C
GPL14143_CBG01900_6533-6592_0.801_66_A
GPL14143_CBG01900_10069-10128_0.771_362_B
MethodGene