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WormBase Tree Display for Gene: WBGene00025288

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Name Class

WBGene00025288SMapS_parentSequencecb25.fpc0053
IdentityVersion3
NameCGC_nameCbr-blmp-1From_analysisInferred_from_orthology
Sequence_nameCBG02201
Molecular_nameCBG02201a
CBG02201a.1
CBP30952
CBG02201b
CBP43974
CBG02201a.2
CBG02201b.1
CBG02201b.2
Other_nameCBG_02201Accession_evidenceNDBHE601486
Public_nameCbr-blmp-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
219 May 2005 11:27:54WBPerson2970Name_changeOther_nameblmp-1
320 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-blmp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classblmp
RNASeq_FPKMWBls:000000211.7003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
20.9522From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.7403From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
29.4159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.0829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
16.9116From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.7348From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.40839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.37688From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.34538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
10.4833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
7.07902From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000453.0782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
55.3727From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
57.6673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
53.27From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
55.8296From_analysisRNASeq.briggsae.WBls:0000004.control_mean
56.5675From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
58.5652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002727.5037From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.55444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
69.4853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.47127From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.3603From_analysisRNASeq.briggsae.WBls:0000027.control_median
25.2494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
26.9401From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003564.8744From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.6642From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.6512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
22.197From_analysisRNASeq.briggsae.WBls:0000038.control_median
25.7428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
27.7283From_analysisRNASeq.briggsae.WBls:0000038.control_mean
53.8552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.02685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.72859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.78115From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.8337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.24115From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.37547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.49284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.92407From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.08695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006313.2901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.4019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.68708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.85798From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.69415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.78624From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.1223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
9.27606From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.84225From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010112.6642From_analysisRNASeq.briggsae.total_over_all_stages.control_median
23.6824From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.3736From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.2029From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
Paralog (13)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; Zinc finger C2H2-type; and SET domain. Is an ortholog of C. elegans blmp-1. In C. elegans, blmp-1 is involved in negative regulation of distal tip cell migration; regulation of developmental process; and regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02201a
CBG02201b
Corresponding_CDS_historyCBG02201:bp194
Corresponding_transcriptCBG02201a.1
CBG02201a.2
CBG02201b.1
CBG02201b.2
Other_sequence (29)
Experimental_infoExpr_patternExpr1056023
Microarray_resultsGPL8303_CB6_WBGene00025288_A
GPL8303_CB6_WBGene00025288_B
GPL14143_CBG02201_1612-1671_0.909_22_C
GPL14143_CBG02201_1672-1731_0.892_34_B
GPL14143_CBG02201_1808-1867_0.929_13_A
Reference (20)
MethodGene