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WormBase Tree Display for Gene: WBGene00025301

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Name Class

WBGene00025301SMapS_parentSequencecb25.fpc0053
IdentityVersion2
NameCGC_nameCbr-duo-3From_analysisInferred_from_orthology
Sequence_nameCBG02215
Molecular_nameCBG02215
CBG02215.1
CBP40659
Other_nameCBG_02215Accession_evidenceNDBHE601486
Public_nameCbr-duo-3
DB_infoDatabaseNDBlocus_tagCBG_02215
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-duo-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classduo
RNASeq_FPKMWBls:000000214.371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.4642From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
21.6716From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.1796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
21.9654From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.1555From_analysisRNASeq.briggsae.WBls:0000002.control_median
22.8467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000332.0587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
36.5816From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.1044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
36.9069From_analysisRNASeq.briggsae.WBls:0000003.control_mean
37.5577From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000422.0703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
23.795From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
25.5197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
21.4765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
21.8799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
23.5508From_analysisRNASeq.briggsae.WBls:0000004.control_mean
26.8075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.969412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.8249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.17198From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.98876From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.39164From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.1444From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.6113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.81116From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.3101From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.3141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
11.3707From_analysisRNASeq.briggsae.WBls:0000038.control_mean
21.9481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.91444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.30612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004116.2778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
34.5961From_analysisRNASeq.briggsae.WBls:0000041.control_mean
37.2723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
39.5689From_analysisRNASeq.briggsae.WBls:0000041.control_median
41.8654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
42.969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
25.2969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
32.8276From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.2845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
35.2784From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006313.5484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.7629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
14.0213From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.6669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.0188From_analysisRNASeq.briggsae.WBls:0000063.control_mean
33.0947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.8441From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.5222From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.0392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010117.3665From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.3854From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
20.5784From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
21.2517From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00128679
00128680
Contained_in_operonCBOPA0091
Ortholog (27)
Paralog (16)
Structured_descriptionAutomated_descriptionPredicted to enable cysteine-type deubiquitinase activity. Is an ortholog of C. elegans duo-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02215
Corresponding_CDS_historyCBG02215:bp194
CBG02215:bp255
Corresponding_transcriptCBG02215.1
Other_sequenceCRC06719_1
CR04032
Experimental_infoExpr_patternExpr1059434
Microarray_resultsGPL8303_CB6_WBGene00025301_A
GPL8303_CB6_WBGene00025301_B
GPL8303_CB6_WBGene00025301_C
GPL14143_CBG02215_2163-2222_0.931_8_A
MethodGene