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WormBase Tree Display for Gene: WBGene00025352

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Name Class

WBGene00025352SMapS_parentSequencecb25.fpc0058
IdentityVersion4
NameCGC_nameCbr-btbd-10From_analysisInferred_from_orthology
Sequence_nameCBG02271
Molecular_nameCBG02271
CBG02271.1
CBP49251
Other_nameCBG_02271Accession_evidenceNDBHE601438
Cbr-snpc-1.4
Public_nameCbr-btbd-10
DB_infoDatabaseNDBlocus_tagCBG_02271
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
211 Apr 2012 13:56:30WBPerson2970Name_changeCGC_nameCbr-btbd-10
304 Jul 2013 14:05:09WBPerson2970Name_changeCGC_nameCbr-snpc-1.4
Other_nameCbr-btbd-10
404 Mar 2014 11:26:21WBPerson2970Name_changeCGC_nameCbr-btbd-10
Other_nameCbr-snpc-1.4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbtbd
RNASeq_FPKMWBls:000000245.3844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
51.2987From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
51.3654From_analysisRNASeq.briggsae.WBls:0000002.control_mean
57.4131From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
54.3559From_analysisRNASeq.briggsae.WBls:0000002.control_median
55.7952From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.0844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000373.9137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
79.8809From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
85.848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
85.5449From_analysisRNASeq.briggsae.WBls:0000003.control_mean
96.873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000475.177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
78.6452From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
82.1134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
72.1063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
75.9217From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
77.8505From_analysisRNASeq.briggsae.WBls:0000004.control_mean
83.934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.6566From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.801From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.06408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
40.6822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
25.4682From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.1694From_analysisRNASeq.briggsae.WBls:0000027.control_median
45.47From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003540.0363From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.5035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
28.7518From_analysisRNASeq.briggsae.WBls:0000038.control_mean
29.9565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
30.7887From_analysisRNASeq.briggsae.WBls:0000038.control_median
31.6208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
38.9265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004145.3915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
76.6762From_analysisRNASeq.briggsae.WBls:0000041.control_mean
84.0807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
85.5607From_analysisRNASeq.briggsae.WBls:0000041.control_median
87.0406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
90.1922From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
61.1321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
66.1209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
72.3263From_analysisRNASeq.briggsae.WBls:0000041.control_mean
75.1008From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006340.9212From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
41.7013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
44.3428From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
48.3441From_analysisRNASeq.briggsae.WBls:0000063.control_mean
50.4939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
64.2614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
47.4184From_analysisRNASeq.briggsae.WBls:0000063.control_median
50.2068From_analysisRNASeq.briggsae.WBls:0000063.control_mean
59.52From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010145.3915From_analysisRNASeq.briggsae.total_over_all_stages.control_median
49.2717From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
50.8963From_analysisRNASeq.briggsae.total_over_all_stages.control_median
54.1853From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: BTBD10/KCTD20; SKP1/BTB/POZ domain superfamily; BTB/POZ domain; and BTBD10/KCTD20, BTB/POZ domain. Is an ortholog of C. elegans btbd-10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02271
Corresponding_CDS_historyCBG02271:bp194
CBG02271:bp266
Corresponding_transcriptCBG02271.1
Other_sequence (36)
Experimental_infoExpr_patternExpr1065303
Microarray_resultsGPL8303_CB6_WBGene00025352_A
GPL14143_CBG02271_910-969_0.661_114_C
GPL14143_CBG02271_1276-1335_0.718_72_B
GPL14143_CBG02271_1393-1452_0.797_4_A
MethodGene