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WormBase Tree Display for Gene: WBGene00025676

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Name Class

WBGene00025676SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-nhr-22From_analysisInferred_from_orthology
Sequence_nameCBG02664
Molecular_nameCBG02664
CBG02664.1
CBP00677
Other_nameCBG_02664Accession_evidenceNDBHE601438
Public_nameCbr-nhr-22
DB_infoDatabaseNDBlocus_tagCBG_02664
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000024.98414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.36471From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.08486From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.90572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.45547From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.54623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.9502From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.8217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
7.48491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.15331From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
8.75154From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
9.01938From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000416.704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
16.8637From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.0234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
14.9048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
15.9735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
16.6209From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.4986From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.852833From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.09557From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.66224From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.03832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.51755From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.98157From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.93954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.01737From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.7774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.52638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.35657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.9478From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.24371From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.13086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000412.98545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.67203From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.7026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
3.83085From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.95909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.04099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.56203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.65504From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.68008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.69134From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000633.77932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.78896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.38981From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.79719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.12118From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.85064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.53543From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.68104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.04783From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001015.36471From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.94677From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.45547From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.42088From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129099
00129100
00129101
00129102
Ortholog (27)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-22.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02664
Corresponding_CDS_historyCBG02664:bp194
Corresponding_transcriptCBG02664.1
Experimental_infoExpr_patternExpr1050031
Microarray_resultsGPL8303_CB6_WBGene00025676_A
GPL8303_CB6_WBGene00025676_B
GPL14143_CBG02664_1429-1488_0.792_20_B
GPL14143_CBG02664_1498-1557_0.813_2_C
GPL14143_CBG02664_1586-1645_0.815_1_A
MethodGene