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WormBase Tree Display for Gene: WBGene00025804

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Name Class

WBGene00025804SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-efhd-1From_analysisInferred_from_orthology
Sequence_nameCBG02826
Molecular_nameCBG02826a
CBG02826a.1
CBP44788
CBG02826b
CBP47354
CBG02826b.1
Other_nameCBG_02826Accession_evidenceNDBHE601438
Public_nameCbr-efhd-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
228 Sep 2012 14:32:03WBPerson2970Name_changeCGC_nameCbr-efhd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classefhd
RNASeq_FPKMWBls:0000002121.178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
61.2738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
78.9458From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
87.1325From_analysisRNASeq.briggsae.WBls:0000002.control_mean
100.062From_analysisRNASeq.briggsae.WBls:0000002.control_median
109.109From_analysisRNASeq.briggsae.WBls:0000002.control_mean
175.039From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003716.238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
726.626From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
737.014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
770.82From_analysisRNASeq.briggsae.WBls:0000003.control_mean
859.207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004279.055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
298.159From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
317.264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
251.334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
287.945From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
331.103From_analysisRNASeq.briggsae.WBls:0000004.control_mean
519.918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.5459From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.3332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
26.9638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.34068From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
15.1522From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.4234From_analysisRNASeq.briggsae.WBls:0000027.control_mean
34.056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003514.8668From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.3602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.3557From_analysisRNASeq.briggsae.WBls:0000038.control_median
19.2838From_analysisRNASeq.briggsae.WBls:0000038.control_mean
22.3513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.69793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
39.7257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041290.966From_analysisRNASeq.briggsae.WBls:0000041.control_mean
361.313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
361.685From_analysisRNASeq.briggsae.WBls:0000041.control_median
362.057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
386.412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
54.0832From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
120.819From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
228.901From_analysisRNASeq.briggsae.WBls:0000041.control_mean
241.066From_analysisRNASeq.briggsae.WBls:0000041.control_median
88.7231From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006324.3816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
37.3239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
44.2029From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
45.774From_analysisRNASeq.briggsae.WBls:0000063.control_mean
54.0041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
68.9577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
108.671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
49.1035From_analysisRNASeq.briggsae.WBls:0000063.control_median
56.2569From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101138.285From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
47.7806From_analysisRNASeq.briggsae.total_over_all_stages.control_median
169.894From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
61.5948From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00129203
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans efhd-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02826a
CBG02826b
Corresponding_CDS_historyCBG02826:bp182
CBG02826:bp255
Corresponding_transcriptCBG02826a.1
CBG02826b.1
Other_sequence (35)
Experimental_infoExpr_patternExpr1053785
Microarray_resultsGPL8303_CB6_WBGene00025804_A
GPL14143_CBG02826_1804-1863_0.778_18_B
GPL14143_CBG02826_1891-1950_0.758_32_C
GPL14143_CBG02826_1957-2016_0.620_164_A
MethodGene