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WormBase Tree Display for Gene: WBGene00026031

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Name Class

WBGene00026031SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-tnc-2From_analysisInferred_from_orthology
Sequence_nameCBG03100
Molecular_nameCBG03100a
CBG03100a.1
CBP32298
CBG03100b
CBP43046
CBG03100b.1
Other_nameCBG_03100Accession_evidenceNDBHE601438
Public_nameCbr-tnc-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tnc-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtnc
RNASeq_FPKMWBls:0000002126.585From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
161.733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.20309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
98.8404From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.4332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
74.0091From_analysisRNASeq.briggsae.WBls:0000002.control_median
79.4886From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.645138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
10.0564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
5.35077From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
17.1782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
9.29325From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000466.3701From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
68.9809From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
71.5917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
121.541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
132.13From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
77.4451From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
93.8156From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:0000027108.223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
16.7984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
33.3206From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
52.7807From_analysisRNASeq.briggsae.WBls:0000027.control_mean
101.671From_analysisRNASeq.briggsae.WBls:0000027.control_mean
248.341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
70.7718From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035178.036From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038135.561From_analysisRNASeq.briggsae.WBls:0000038.control_mean
164.951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
165.283From_analysisRNASeq.briggsae.WBls:0000038.control_median
165.616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
175.533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
36.1451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041100.703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
34.4887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
46.3901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
54.6432From_analysisRNASeq.briggsae.WBls:0000041.control_median
61.1195From_analysisRNASeq.briggsae.WBls:0000041.control_mean
62.8963From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
62.6073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
62.7518From_analysisRNASeq.briggsae.WBls:0000041.control_median
64.5398From_analysisRNASeq.briggsae.WBls:0000041.control_mean
80.1535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006328.4891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
32.9457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
32.9723From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
37.0679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
43.8683From_analysisRNASeq.briggsae.WBls:0000063.control_mean
87.8666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
35.0201From_analysisRNASeq.briggsae.WBls:0000063.control_median
48.002From_analysisRNASeq.briggsae.WBls:0000063.control_mean
68.6706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010166.3701From_analysisRNASeq.briggsae.total_over_all_stages.control_median
94.434From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
69.7989From_analysisRNASeq.briggsae.total_over_all_stages.control_median
93.897From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129472
Ortholog (29)
Paralog (16)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans tnc-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03100a
CBG03100b
Corresponding_CDS_historyCBG03100:bp194
Corresponding_transcriptCBG03100a.1
CBG03100b.1
Other_sequence (82)
Experimental_infoExpr_patternExpr1054465
Microarray_resultsGPL8303_CB6_WBGene00026031_A
GPL8303_CB6_WBGene00026031_B
GPL14143_CBG03100_19-78_0.868_3_C
GPL14143_CBG03100_129-188_0.807_8_A
GPL14143_CBG03100_214-273_0.869_2_B
MethodGene