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WormBase Tree Display for Gene: WBGene00026493

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Name Class

WBGene00026493SMapS_parentSequencecb25.fpc0071a
IdentityVersion2
NameCGC_nameCbr-nhr-273From_analysisInferred_from_orthology
Sequence_nameCBG03687
Molecular_nameCBG03687
CBG03687.1
CBP31239
Other_nameCBG_03687Accession_evidenceNDBHE600948
Public_nameCbr-nhr-273
DB_infoDatabaseNDBlocus_tagCBG_03687
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-nhr-273
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000021.03009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.1789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.29887From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.50262From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.65173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.4753From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.5399From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.30798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.96463From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.62128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.00373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.64433From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.04141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.59529From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.14918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
4.2455From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.42623From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.14602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.54903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.109934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.782375From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.46204From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.49382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.28018From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.77799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.29103From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000352.06203From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.925446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.69079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.19334From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.69588From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.69748From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.4778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.57779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.89662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.11242From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.32821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.49597From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.18127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.00348From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.4969From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.67875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.31876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000632.40675From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.45468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.28162From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.3401From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.72094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.83651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.98159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.36815From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.94702From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.69588From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.42328From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.75005From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.4639From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130008
00130009
00130010
00130011
Ortholog (63)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-273.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03687
Corresponding_CDS_historyCBG03687:bp194
Corresponding_transcriptCBG03687.1
Other_sequenceCJC04763_1
Experimental_infoExpr_patternExpr1065135
Microarray_resultsGPL8303_CB6_WBGene00026493_A
GPL8303_CB6_WBGene00026493_B
GPL14143_CBG03687_859-918_0.838_5_C
GPL14143_CBG03687_990-1049_0.795_24_B
GPL14143_CBG03687_1102-1161_0.496_167_A
MethodGene