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WormBase Tree Display for Gene: WBGene00026494

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Name Class

WBGene00026494SMapS_parentSequencecb25.fpc0071a
IdentityVersion1
NameSequence_nameCBG03688
Molecular_nameCBG03688
CBG03688.1
CBP34899
Other_nameCBG_03688Accession_evidenceNDBHE600948
Public_nameCBG03688
DB_infoDatabaseNDBlocus_tagCBG_03688
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00001107
WBVar00001092
WBVar00001077
WBVar00001112
WBVar00001097
WBVar00001082
WBVar00001102
WBVar00001072
WBVar00001087
RNASeq_FPKMWBls:00000020.418814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
10.0386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.51229From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.9899From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.575From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.63771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.40185From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.048022From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.096043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.032015From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.076229From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.152458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.124161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.138742From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.176524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.240566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.052458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.062236From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.925888From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.66297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.564218From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.960966From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.0662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.69257From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.441699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.663527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.777822From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.892118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.83598From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.34656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.33612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.74991From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.8651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.86759From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.87009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.92831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.8992From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.00045From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.44617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.55693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006312.744From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.42666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.69179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.30289From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.94715From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.57043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.50721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.99734From_analysisRNASeq.briggsae.WBls:0000063.control_median
6.20716From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.51229From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.70415From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.28925From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.39936From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130012
00130013
00130014
00130015
Ortholog (61)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-109; nhr-16; and nhr-273.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03688
Corresponding_CDS_historyCBG03688:bp194
Corresponding_transcriptCBG03688.1
Other_sequenceJI182797.1
Experimental_infoExpr_patternExpr1057159
Microarray_resultsGPL8303_CB6_WBGene00026494_A
GPL8303_CB6_WBGene00026494_B
GPL14143_CBG03688_841-900_0.833_4_B
GPL14143_CBG03688_962-1021_0.840_1_A
MethodGene