WormBase Tree Display for Gene: WBGene00026504

WBGene00026504 SMap: S_parent: Sequence: cb25.fpc0071d
  Identity: Version: 2
    Name: CGC_name: Cbr-cel-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03700
      Molecular_name: CBG03700
        CBG03700.1
        CBP14803
      Other_name: CBG_03700 Accession_evidence: NDB HE600990
      Public_name: Cbr-cel-1
    DB_info: Database: NDB locus_tag CBG_03700
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-cel-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cel
    Allele: WBVar00108724
    RNASeq_FPKM: WBls:0000002 0.203252 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        2.69984 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        7.89626 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        11.4421 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        4.04976 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        4.8854 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 19.9167 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        9.95835 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        6.6389 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        10.553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        2.1106 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (11)
      WBls:0000027 0.368984 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.614655 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.47498 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.921982 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.25195 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.16385 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 6.16388 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.46595 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        3.82039 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        4.18474 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        6.90353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        6.91209 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 15.0059 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        15.0926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        15.2305 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        15.3684 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        15.6698 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        17.2124 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        15.8933 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        16.2598 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        16.4183 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        18.4611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 1.13214 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        5.66069 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.943448 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.273271 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        4.50324 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.321128 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        5.12191 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00130016
      00130017
      00130018
      00130019
    Ortholog (35)
    Paralog: WBGene00026554 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00024235 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00270511 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; mRNA 5'-phosphatase activity; and mRNA guanylyltransferase activity. Predicted to be involved in 7-methylguanosine mRNA capping. Is an ortholog of C. elegans cel-1. In C. elegans, cel-1 is involved in polynucleotide 5' dephosphorylation and positive regulation of gene expression. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG03700
    Corresponding_CDS_history: CBG03700:bp194
      CBG03700:bp258
    Corresponding_transcript: CBG03700.1
    Other_sequence (29)
  Method: Gene