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WormBase Tree Display for Gene: WBGene00026806

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Name Class

WBGene00026806SMapS_parentSequencecb25.fpc0071c2
IdentityVersion2
NameCGC_nameCbr-nhr-2From_analysisInferred_from_orthology
Sequence_nameCBG04060
Molecular_nameCBG04060
CBG04060.1
CBP44492
Other_nameCBG_04060Accession_evidenceNDBHE600906
Public_nameCbr-nhr-2
DB_infoDatabaseNDBlocus_tagCBG_04060
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000024.87178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.58951From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.87187From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.02489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.4795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.94838From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.81201From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003109.869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
124.592From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
139.315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
111.767From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
120.317From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000465.0699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
66.8138From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
68.5577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
62.8435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
71.9082From_analysisRNASeq.briggsae.WBls:0000004.control_mean
79.3381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
83.7317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (11)
WBls:00000270.075695From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.188589From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.490074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.282884From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.47155From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.32043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.10599From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.232056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.714042From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.768559From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.780886From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.793213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.06234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004112.8405From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.1828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.3202From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.4576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
17.1136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.60815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
11.1348From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.2254From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.17861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.26802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.19351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.86762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.92069From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.92536From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.81312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.80386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.36924From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.61449From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.0835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010116.6823From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.60815From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.6789From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
5.36924From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00130413
00130414
00130415
00130416
Ortholog (29)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04060
Corresponding_CDS_historyCBG04060:bp194
CBG04060:bp255
Corresponding_transcriptCBG04060.1
Other_sequenceEF041130.1
JI166756.1
BMC07709_1
AF260232.1
CR07059
CRC09544_1
U19360.1
Experimental_infoExpr_patternExpr1052955
Microarray_resultsGPL8303_CB6_WBGene00026806_A
GPL8303_CB6_WBGene00026806_B
GPL14143_CBG04060_717-776_0.751_170_B
GPL14143_CBG04060_882-941_0.925_12_C
GPL14143_CBG04060_1212-1271_0.941_6_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene