Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00026840

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00026840SMapS_parentSequencecb25.fpc0071f
IdentityVersion2
NameCGC_nameCbr-itx-1From_analysisInferred_from_orthology
Sequence_nameCBG04100
Molecular_nameCBG04100
CBG04100.1
CBP41007
Other_nameCBG_04100Accession_evidenceNDBHE600956
Public_nameCbr-itx-1
DB_infoDatabaseNDBlocus_tagCBG_04100
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-itx-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classitx
RNASeq_FPKMWBls:000000211.1022From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.3198From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.0606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.7967From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
13.196From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.82437From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.94945From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.142281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.60942From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.07656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.949634From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.63006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000048.28626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
8.75689From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.22752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
7.76153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
8.61856From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.85135From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
8.96616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.30954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.67809From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.18388From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.6938From_analysisRNASeq.briggsae.WBls:0000027.control_median
11.0653From_analysisRNASeq.briggsae.WBls:0000027.control_mean
16.7096From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003515.3579From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.6036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
13.4408From_analysisRNASeq.briggsae.WBls:0000038.control_mean
13.6901From_analysisRNASeq.briggsae.WBls:0000038.control_median
15.7765From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
21.9709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.41206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004112.3062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.3638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6.72856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.21268From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.6968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.27384From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.6786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.15499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.4259From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.65483From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006311.4807From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
11.8677From_analysisRNASeq.briggsae.WBls:0000063.control_mean
12.3496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.6376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.11068From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.75971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
10.6202From_analysisRNASeq.briggsae.WBls:0000063.control_median
10.6772From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.72516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.8899From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.1022From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.266From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.1691From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (29)
Paralog (43)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: EGF-like domain; Laminin G domain; and Concanavalin A-like lectin/glucanase domain superfamily. Is an ortholog of C. elegans itx-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04100
Corresponding_CDS_historyCBG04100:bp255
Corresponding_transcriptCBG04100.1
Other_sequenceEX911309.1
Hbac_isotig07106
Oden_isotig24110
HBC28443_1
ES410955.1
HBC02068_1
ES409074.1
Experimental_infoExpr_patternExpr1061501
Microarray_resultsGPL8303_CB6_WBGene00026840_A
GPL8303_CB6_WBGene00026840_B
GPL14143_CBG04100_2808-2867_0.799_99_A
GPL14143_CBG04100_2832-2891_0.787_120_B
GPL14143_CBG04100_4209-4268_0.874_22_C
MethodGene