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WormBase Tree Display for Gene: WBGene00026962

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Name Class

WBGene00026962SMapS_parentSequencecb25.fpc0072a
IdentityVersion1
NameSequence_nameCBG04248
Molecular_nameCBG04248
CBG04248.1
CBP43040
Other_nameCBG_04248Accession_evidenceNDBHE600920
Public_nameCBG04248
DB_infoDatabaseNDBlocus_tagCBG_04248
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.48247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.96198From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.09117From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.31229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.6953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.89323From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.89531From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.03848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.07122From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.10396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.604311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.915584From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.772169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.07582From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.37947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.449712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.627181From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.733681From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.792443From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.633353From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.09662From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.65652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.64494From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.68053From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.43224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.45138From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.51082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.05311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.59788From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.60306From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.14264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.70565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000411.24177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.25263From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.38886From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.52509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.92278From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.67163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.49099From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.56121From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.4569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.21926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.39526From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.531404From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.50717From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.61491From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.39179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.60247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.53769From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.6526From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.69029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.61491From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.96297From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.6526From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.94303From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00130611
Contained_in_operonCBOPA0654
Ortholog (25)
Structured_descriptionAutomated_descriptionPredicted to be part of acetylcholine-gated channel complex. Is an ortholog of C. elegans Y54E2A.10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04248
Corresponding_CDS_historyCBG04248:bp194
CBG04248:bp255
Corresponding_transcriptCBG04248.1
Other_sequenceDviv_isotig15989
Dviv_isotig15991
CBC00190_1
Experimental_infoExpr_patternExpr1066568
Microarray_resultsGPL8303_CB6_WBGene00026962_A
GPL8303_CB6_WBGene00026962_B
GPL14143_CBG04248_313-372_0.807_15_B
GPL14143_CBG04248_318-377_0.817_12_A
GPL14143_CBG04248_529-588_0.670_52_C
MethodGene