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WormBase Tree Display for Gene: WBGene00027163

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Name Class

WBGene00027163SMapS_parentSequencecb25.fpc0083
IdentityVersion3
NameCGC_nameCbr-abl-1From_analysisInferred_from_orthology
Sequence_nameCBG04507
Molecular_nameCBG04507a
CBG04507a.1
CBP36394
CBG04507b
CBP46156
CBG04507b.1
Other_nameCBG_04507Accession_evidenceNDBHE601277
CBG_27575
Public_nameCbr-abl-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-abl-1
331 Aug 2016 10:29:45WBPerson4025EventAcquires_mergeWBGene00088989
Acquires_mergeWBGene00088989
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classabl
Allele (16)
RNASeq_FPKMWBls:000000210.8762From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.2243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.75005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.95018From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.56127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.35295From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.81312From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000317.3259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.538From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
19.7502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
19.191From_analysisRNASeq.briggsae.WBls:0000003.control_mean
20.4968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000442.3237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
44.0934From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
45.8632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
41.3843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
42.9277From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
43.1686From_analysisRNASeq.briggsae.WBls:0000004.control_mean
43.3442From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.49585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.7211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.04934From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.08876From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.8373From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.8852From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.0828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003518.3315From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.0794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
16.8856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.13705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.62846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.85393From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.43263From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:00000414.85015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.19121From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.48042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.68352From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7.50152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.81578From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.11227From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.15114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.7884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.96804From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.2403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.27777From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.61183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.71032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.4448From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.56525From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.5513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.5278From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.62846From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.8314From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.9339From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00130771
00130772
00130773
00130774
00130775
Ortholog (26)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and non-membrane spanning protein tyrosine kinase activity. Is an ortholog of C. elegans abl-1. In C. elegans, abl-1 is involved in several processes, including defense response to other organism; negative regulation of DNA damage response, signal transduction by p53 class mediator; and negative regulation of engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04507a
CBG04507b
Corresponding_CDS_historyCBG04507:bp194
CBG04507:bp255
Corresponding_transcriptCBG04507a.1
CBG04507b.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1050746
Expr1060943
Microarray_resultsGPL8303_CB6_WBGene00027163_A
GPL8303_CB6_WBGene00027163_B
GPL14143_CBG04507_2091-2150_0.743_171_C
GPL14143_CBG04507_2283-2342_0.764_115_A
GPL14143_CBG04507_3599-3658_0.731_212_B
GPL14143_CBG27575_23-82_0.653_1_A
MethodGene