Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00027396

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00027396SMapS_parentSequencecb25.fpc0090
IdentityVersion2
NameCGC_nameCbr-yif-1From_analysisInferred_from_orthology
Sequence_nameCBG04787
Molecular_nameCBG04787a
CBG04787a.1
CBP15126
CBG04787b
CBP44841
CBG04787b.1
Other_nameCBG_04787Accession_evidenceNDBHE601135
Public_nameCbr-yif-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
219 Dec 2008 11:56:08WBPerson2970Name_changeCGC_nameCbr-yif-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classyif
RNASeq_FPKMWBls:000000239.498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
43.0901From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
43.5863From_analysisRNASeq.briggsae.WBls:0000002.control_mean
48.1709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
24.4609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
38.805From_analysisRNASeq.briggsae.WBls:0000002.control_mean
41.294From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000353.752From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
54.3489From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
54.9458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
47.1374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
51.9451From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000455.9881From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
57.2659From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
58.5438From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.4412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
54.9534From_analysisRNASeq.briggsae.WBls:0000004.control_mean
57.1233From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
62.6705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.6831From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
19.882From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.36273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
45.6002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
17.5467From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.0141From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.4104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003542.2022From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003817.0386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
37.5513From_analysisRNASeq.briggsae.WBls:0000038.control_mean
38.098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
41.561From_analysisRNASeq.briggsae.WBls:0000038.control_median
45.024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
50.0447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004142.4969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
45.1472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
45.8565From_analysisRNASeq.briggsae.WBls:0000041.control_median
46.5658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
47.3701From_analysisRNASeq.briggsae.WBls:0000041.control_mean
55.2706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
50.9182From_analysisRNASeq.briggsae.WBls:0000041.control_median
54.7683From_analysisRNASeq.briggsae.WBls:0000041.control_mean
59.4312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
79.6981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
22.6733From_analysisRNASeq.briggsae.WBls:0000063.control_mean
24.0742From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
24.4914From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
27.1069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
37.694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.1582From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.7992From_analysisRNASeq.briggsae.WBls:0000063.control_median
31.5825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010138.1595From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
43.6541From_analysisRNASeq.briggsae.total_over_all_stages.control_median
40.3574From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
44.2108From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00130955
00130956
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in endoplasmic reticulum membrane. Is an ortholog of C. elegans yif-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04787a
CBG04787b
Corresponding_CDS_historyCBG04787:bp194
Corresponding_transcriptCBG04787a.1
CBG04787b.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1063309
Microarray_resultsGPL8303_CB6_WBGene00027396_A
GPL8303_CB6_WBGene00027396_B
GPL14143_CBG04787_368-427_0.917_15_B
GPL14143_CBG04787_421-480_0.836_62_C
GPL14143_CBG04787_641-700_0.895_21_A
MethodGene