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WormBase Tree Display for Gene: WBGene00028022

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Name Class

WBGene00028022SMapS_parentSequencecb25.fpc0129
IdentityVersion2
NameCGC_nameCbr-famh-161From_analysisInferred_from_orthology
Sequence_nameCBG05607
Molecular_nameCBG05607
CBG05607.1
CBP34309
Other_nameCBG_05607Accession_evidenceNDBHE601419
Public_nameCbr-famh-161
DB_infoDatabaseNDBlocus_tagCBG_05607
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
213 Jan 2017 19:46:09WBPerson2970Name_changeCGC_nameCbr-famh-161
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfamh
AlleleWBVar00136420
WBVar00136421
RNASeq_FPKMWBls:00000020.535756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.01507From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.12571From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.38376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.558954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.842332From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.901045From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.214537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.04001From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.86549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.17158From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.43471From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000048.6191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.21486From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.81063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
10.8606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.82584From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.85194From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
9.98692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.131112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.571923From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.25887From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.07357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.82275From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.8894From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.78101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.61885From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.268336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.66021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.86195From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.06369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.16093From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.6515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.117536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.173785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.221189From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.268592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.444986From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.22003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.648201From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.677467From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.02781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.25705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.108264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.138686From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.141823From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.178267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.265078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.159311From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.160045From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.262436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.66021From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.87196From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.0947From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.45548From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0629
OrthologWBGene00012626Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00063514Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00159730Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00128840Caenorhabditis japonicaFrom_analysisInparanoid_8
CBOVI.g511Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g2418Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7232Caenorhabditis panamensisFrom_analysisWormBase-Compara
Cni-Y38H6C.14Caenorhabditis nigoniFrom_analysisWormBase-Compara
chrV_pilon.g18107Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans famh-161.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05607
Corresponding_CDS_historyCBG05607:bp194
Corresponding_transcriptCBG05607.1
Experimental_infoExpr_patternExpr1068908
Microarray_resultsGPL8303_CB6_WBGene00028022_A
GPL8303_CB6_WBGene00028022_B
GPL14143_CBG05607_1909-1968_0.932_3_B
GPL14143_CBG05607_2091-2150_0.948_1_C
GPL14143_CBG05607_2191-2250_0.777_136_A
MethodGene