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WormBase Tree Display for Gene: WBGene00028144

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Name Class

WBGene00028144SMapS_parentSequencecb25.fpc0143a
IdentityVersion2
NameCGC_nameCbr-nhr-105From_analysisInferred_from_orthology
Sequence_nameCBG05753
Molecular_nameCBG05753a
CBG05753a.1
CBP45051
CBG05753b
CBP38387
CBG05753b.1
Other_nameCBG_05753Accession_evidenceNDBHE600909
Public_nameCbr-nhr-105
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-nhr-105
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000211.3633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
14.2353From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
17.1176From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.7541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
12.7993From_analysisRNASeq.briggsae.WBls:0000002.control_median
14.661From_analysisRNASeq.briggsae.WBls:0000002.control_mean
7.29136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000036.18549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
6.46222From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
6.73895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
7.53109From_analysisRNASeq.briggsae.WBls:0000003.control_mean
9.66883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000414.8221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
16.1152From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
17.4083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.7193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.6905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
15.8268From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.4936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.41681From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.7687From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.62245From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
62.2668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.5168From_analysisRNASeq.briggsae.WBls:0000027.control_median
23.6793From_analysisRNASeq.briggsae.WBls:0000027.control_mean
26.4112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003521.7078From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.4855From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.54379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.5146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
16.6422From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.7697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.76024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.53293From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.05618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6.09408From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.13198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
6.18332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.61239From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.04717From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.53893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000635.31152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.39333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6.62122From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
6.91523From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.64713From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.60294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.3312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.13417From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.31789From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010114.3181From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.60294From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.5161From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.0785From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131561
00131562
00131563
00131564
Ortholog (28)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-105.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05753a
CBG05753b
Corresponding_CDS_historyCBG05753:bp194
CBG05753:bp255
Corresponding_transcriptCBG05753a.1
CBG05753b.1
Other_sequence (26)
Experimental_infoExpr_patternExpr1061487
Microarray_resultsGPL8303_CB6_WBGene00028144_A
GPL8303_CB6_WBGene00028144_B
GPL14143_CBG05753_827-886_0.882_18_C
GPL14143_CBG05753_1023-1082_0.907_8_B
GPL14143_CBG05753_1161-1220_0.759_85_A
MethodGene