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WormBase Tree Display for Gene: WBGene00028363

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Name Class

WBGene00028363SMapS_parentSequencecb25.fpc0143a
IdentityVersion2
NameCGC_nameCbr-ard-1From_analysisInferred_from_orthology
Sequence_nameCBG06017
Molecular_nameCBG06017
CBG06017.1
CBP15439
Other_nameCBG_06017Accession_evidenceNDBHE600909
Public_nameCbr-ard-1
DB_infoDatabaseNDBlocus_tagCBG_06017
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ard-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classard
RNASeq_FPKMWBls:0000002121.329From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
129.17From_analysisRNASeq.briggsae.WBls:0000002.control_mean
167.862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
98.3193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
112.209From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
116.769From_analysisRNASeq.briggsae.WBls:0000002.control_median
124.93From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000344.083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
52.1301From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
60.1771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
52.2176From_analysisRNASeq.briggsae.WBls:0000003.control_mean
52.3926From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000440.7901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
44.2443From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
47.6984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
41.0747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
43.7652From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
45.6741From_analysisRNASeq.briggsae.WBls:0000004.control_mean
55.042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027107.574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
12.4362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
36.8786From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
52.2963From_analysisRNASeq.briggsae.WBls:0000027.control_mean
129.993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
71.7205From_analysisRNASeq.briggsae.WBls:0000027.control_mean
72.2263From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035195.545From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038126.158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
127.435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
146.443From_analysisRNASeq.briggsae.WBls:0000038.control_median
157.095From_analysisRNASeq.briggsae.WBls:0000038.control_mean
165.451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
209.335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041116.878From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
142.199From_analysisRNASeq.briggsae.WBls:0000041.control_mean
142.524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
145.122From_analysisRNASeq.briggsae.WBls:0000041.control_median
147.721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
161.671From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
147.296From_analysisRNASeq.briggsae.WBls:0000041.control_mean
151.841From_analysisRNASeq.briggsae.WBls:0000041.control_median
155.961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
159.02From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063109.821From_analysisRNASeq.briggsae.WBls:0000063.control_mean
122.213From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
145.414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
91.79From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
93.8802From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
95.8077From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
109.01From_analysisRNASeq.briggsae.WBls:0000063.control_median
133.557From_analysisRNASeq.briggsae.WBls:0000063.control_mean
252.238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101112.782From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
121.329From_analysisRNASeq.briggsae.total_over_all_stages.control_median
112.431From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
120.701From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (36)
Paralog (46)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. Is an ortholog of C. elegans ard-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06017
Corresponding_CDS_historyCBG06017:bp194
CBG06017:bp255
Corresponding_transcriptCBG06017.1
Other_sequence (75)
Experimental_infoExpr_patternExpr1052868
Microarray_resultsGPL8303_CB6_WBGene00028363_A
GPL8303_CB6_WBGene00028363_B
GPL14143_CBG06017_68-127_0.908_9_C
GPL14143_CBG06017_402-461_0.817_37_A
GPL14143_CBG06017_467-526_0.934_2_B
Expression_clusterWBPaper00051425:CB_L4_vs_embryo_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene