WormBase Tree Display for Gene: WBGene00028390

WBGene00028390 SMap: S_parent: Sequence: cb25.fpc0143b
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-7 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06052
      Molecular_name: CBG06052
        CBG06052.1
        CBP01502
      Other_name: CBG_06052 Accession_evidence: NDB HE600986
      Public_name: Cbr-nhr-7
    DB_info: Database: NDB locus_tag CBG_06052
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-nhr-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000002 1.17599 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.69998 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.95009 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2.97431 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.07211 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.43798 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.7306 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.368024 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.449293 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.530563 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.637752 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        1.01467 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.42708 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        0.467951 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.508822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.347796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.368396 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.482747 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.761643 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.291962 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.60704 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        2.28626 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        5.95979 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.28342 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        3.5566 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.3676 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 2.92048 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.671378 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.34888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        3.2968 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        3.36536 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        4.38184 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        5.78509 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 0.447577 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.747831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.816821 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.885811 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.15219 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.52756 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.59773 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.63077 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        2.37572 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        2.60186 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.885753 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        1.16582 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        1.64659 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.66486 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.25734 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.36878 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.20973 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        1.42816 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        1.589 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 1.64659 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        3.02031 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.19286 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.75549 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00131860
      00131861
      00131862
      00131863
    Ortholog (29)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06052
    Corresponding_CDS_history: CBG06052:bp194
    Corresponding_transcript: CBG06052.1
    Other_sequence: Oden_isotig25985
      JI229252.1
      Oden_isotig22591
      BXC05747_1
  Experimental_info: Expr_pattern: Expr1070231
    Microarray_results: GPL8303_CB6_WBGene00028390_A
      GPL8303_CB6_WBGene00028390_B
      GPL14143_CBG06052_82-141_0.845_65_B
      GPL14143_CBG06052_544-603_0.852_57_A
      GPL14143_CBG06052_1364-1423_0.954_1_C
  Method: Gene