WormBase Tree Display for Gene: WBGene00028668

WBGene00028668 SMap: S_parent: Sequence: cb25.fpc0156
  Identity: Version: 1
    Name: CGC_name: Cbr-nhr-106 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06379
      Molecular_name: CBG06379
        CBG06379.1
        CBP29912
      Other_name: CBG_06379 Accession_evidence: NDB HE601320
      Public_name: CBG06379
    DB_info: Database: NDB locus_tag CBG_06379
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbr-nhr-106
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000002 1.35139 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        2.08538 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        3.08868 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        5.82926 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.857188 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.71838 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        2.5308 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.050912 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.101825 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.033942 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.080735 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.16147 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.138114 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.187207 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.341891 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.445056 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.635455 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.46131 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.776492 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.822328 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.1996 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.39124 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.36892 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.85713 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.19414 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        3.01936 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        3.04025 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.854425 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.893081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.944606 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.99613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.29139 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.42194 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.42179 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.84745 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        2.07371 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.42925 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 1.20889 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.2175 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        1.32452 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.33569 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.16672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        1.09913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        1.19059 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.27101 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 1.33569 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.39392 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.20855 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.35225 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00132157
      00132158
      00132159
      00132160
    Ortholog (21)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-106. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06379
    Corresponding_CDS_history: CBG06379:bp194
    Corresponding_transcript: CBG06379.1
  Experimental_info: Expr_pattern: Expr1054648
    Microarray_results: GPL8303_CB6_WBGene00028668_A
      GPL8303_CB6_WBGene00028668_B
      GPL14143_CBG06379_697-756_0.869_33_C
      GPL14143_CBG06379_836-895_0.941_4_B
      GPL14143_CBG06379_1092-1151_0.935_5_A
  Method: Gene