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WormBase Tree Display for Gene: WBGene00028673

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Name Class

WBGene00028673SMapS_parentSequencecb25.fpc0156
IdentityVersion7
NameCGC_nameCbr-nhr-131From_analysisInferred_from_orthology
Sequence_nameCBG06385
Molecular_nameCBG06385
CBG06385.1
CBP15676
Other_nameCBG_06385Accession_evidenceNDBHE601320
Cbr-nhr-131From_analysisInferred_from_orthology
Cbr-nhr-131.1From_analysisInferred_from_orthology
Public_nameCbr-nhr-131
DB_infoDatabaseNDBlocus_tagCBG_06385
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-nhr-131
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
408 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCbr-nhr-131.1
508 May 2019 10:09:24WBPerson1983Name_changeCGC_nameCbr-nhr-131
Other_nameCbr-nhr-131.1
601 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
704 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameCbr-nhr-131
828 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-nhr-131.1
Other_nameCbr-nhr-131
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000022.03041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.57736From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.76381From_analysisRNASeq.briggsae.WBls:0000002.control_mean
5.68366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.48849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.03292From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.44498From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.364494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.515771From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.667048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.569909From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.678186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.640551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.872561From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.10457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.593062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.673484From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.847329From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.22498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.087917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.462046From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.86567From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.04706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.688From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.75455From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.15497From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.69166From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.138019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.0221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.23855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.17956From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.87981From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.12057From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000411.86975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.97804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.06689From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.15574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.32912From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.31295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.73434From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.13102From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.41565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.05401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.66946From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.68027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.17905From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.22129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.26667From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.67408From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.69719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
2.93812From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:00001013.17905From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.4204From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.68873From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.21504From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132161
00132162
00132163
00132164
Ortholog (28)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-131.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06385
Corresponding_CDS_historyCBG06385:bp194
CBG06385:bp255
Corresponding_transcriptCBG06385.1
Other_sequenceFD515626.1
CJC17259_1
Oden_isotig27229
PPC04880_1
CBC01709_1
CJC00195_1
Experimental_infoExpr_patternExpr1069833
Microarray_resultsGPL8303_CB6_WBGene00028673_A
GPL8303_CB6_WBGene00028673_B
GPL14143_CBG06385_313-372_0.909_3_C
GPL14143_CBG06385_628-687_0.924_2_B
GPL14143_CBG06385_730-789_0.946_1_A
Remark[180319 gw3] The CGC name Cbr-nhr-131 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
[191001 pad] The CGC name Cbr-nhr-131 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00037413Curator_confirmedWBPerson1983
MethodGene