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WormBase Tree Display for Gene: WBGene00028763

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Name Class

WBGene00028763SMapS_parentSequencecb25.fpc0156
IdentityVersion3
NameCGC_nameCbr-nhr-124.1From_analysisInferred_from_orthology
Sequence_nameCBG06497
Molecular_nameCBG06497a
CBG06497a.1
CBP28893
CBG06497b
CBP45208
CBG06497b.1
Other_nameCBG_06497Accession_evidenceNDBHE601320
CBG_06498
Public_nameCbr-nhr-124.1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
231 Aug 2016 10:29:44WBPerson4025EventAcquires_mergeWBGene00028764
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-nhr-124.1
Acquires_mergeWBGene00028764
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar00136504
WBVar00136505
RNASeq_FPKMWBls:00000020.115258From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.152091From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.341015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.090029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.102644From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.136576From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.091301From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.180452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.276051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.277274From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.578728From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.45891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.24236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
0.259817From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.494636From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000350.291334From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.089446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.173111From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.256775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.30994From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.893537From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.028425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.122018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.168607From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.189802From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.215195From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.393572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.304383From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.41414From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.754747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.970885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.056776From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.283879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.067679From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.122193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.115258From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.259661From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.122106From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.26755From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132223
00132224
00132225
00132226
Contained_in_operonCBOPA0210
Ortholog (28)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-124.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06497a
CBG06497b
Corresponding_CDS_historyCBG06497:bp194
CBG06497:bp255
Corresponding_transcriptCBG06497a.1
CBG06497b.1
Experimental_infoExpr_patternExpr1067587
Expr1069570
Microarray_resultsGPL8303_CB6_WBGene00028763_A
GPL8303_CB6_WBGene00028763_B
GPL8303_CB6_WBGene00028764_A
GPL14143_CBG06497_546-605_0.887_29_C
GPL14143_CBG06497_690-749_0.922_14_B
GPL14143_CBG06497_801-860_0.929_9_A
GPL14143_CBG06498_24-83_0.932_1_A
GPL14143_CBG06498_39-98_0.927_2_C
GPL14143_CBG06498_134-193_0.508_17_B
MethodGene