WormBase Tree Display for Gene: WBGene00028765

WBGene00028765 SMap: S_parent: Sequence: cb25.fpc0156
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-159 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06500
      Molecular_name: CBG06500
        CBG06500.1
        CBP44157
      Other_name: CBG_06500 Accession_evidence: NDB HE601320
      Public_name: Cbr-nhr-159
    DB_info: Database: NDB locus_tag CBG_06500
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-nhr-159
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele: WBVar00006657
      WBVar00006662
    RNASeq_FPKM: WBls:0000002 0.227576 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.302422 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.32013 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.359561 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.088822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.249022 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.273853 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.052765 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.105531 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.035177 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.053716 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.090799 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.177779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.6638 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.9914 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.334723 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.665211 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.669446 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.360468 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.414721 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.472914 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.501189 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.529465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.921152 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        2.26751 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.053661 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.056089 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.103575 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.151062 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.166171 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.403872 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.197084 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.209312 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.243105 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.34808 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.16077 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.342858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.460992 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.033445 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.06689 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.145123 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.32013 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.574884 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.202678 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.483067 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00132227
      00132228
      00132229
      00132230
    Ortholog (21)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-159. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06500
    Corresponding_CDS_history: CBG06500:bp194
      CBG06500:bp255
    Corresponding_transcript: CBG06500.1
  Experimental_info: Expr_pattern: Expr1066335
    Microarray_results: GPL8303_CB6_WBGene00028765_A
      GPL8303_CB6_WBGene00028765_B
      GPL14143_CBG06500_561-620_0.910_6_C
      GPL14143_CBG06500_767-826_0.879_23_A
      GPL14143_CBG06500_803-862_0.881_22_B
  Method: Gene