WormBase Tree Display for Gene: WBGene00028860

WBGene00028860 SMap: S_parent: Sequence: cb25.fpc0156
  Identity: Version: 2
    Name: CGC_name: Cbr-nhr-178 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06611
      Molecular_name: CBG06611
        CBG06611.1
        CBP26115
      Other_name: CBG_06611 Accession_evidence: NDB HE601320
      Public_name: Cbr-nhr-178
    DB_info: Database: NDB locus_tag CBG_06611
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-nhr-178
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000002 1.15867 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.54583 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.69617 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.78264 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.21756 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.45686 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.46376 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.133829 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.347744 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.561659 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.1293 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.143639 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.152465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.224178 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 0.153709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.821654 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.874791 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.64901 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.23533 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.16027 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        6.01669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 6.02878 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.0589 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        14.7853 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        4.84603 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        7.19761 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        7.30985 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        9.54919 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.502077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.862157 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.910623 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.959089 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1.29176 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.84373 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1.54091 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.71978 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.12273 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        3.02892 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.46581 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.748258 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.771346 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.03913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        1.60353 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.893694 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.926578 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.70274 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 1.03913 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.33754 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        1.0989 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.16586 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00132316
      00132317
      00132318
      00132319
    Ortholog (22)
    Paralog (220)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-178. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06611
    Corresponding_CDS_history: CBG06611:bp194
    Corresponding_transcript: CBG06611.1
    Other_sequence: CR03068
      Dviv_isotig19448
      CRC09272_1
  Experimental_info: Microarray_results: GPL8303_CB6_WBGene00028860_A
    Expression_cluster: WBPaper00058955:heatshock_upregulated_CBG
  Method: Gene