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WormBase Tree Display for Gene: WBGene00029121

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Name Class

WBGene00029121SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-cya-1From_analysisInferred_from_orthology
Sequence_nameCBG06936
Molecular_nameCBG06936
CBG06936.1
CBP28013
Other_nameCBG_06936Accession_evidenceNDBHE601347
Public_nameCbr-cya-1
DB_infoDatabaseNDBlocus_tagCBG_06936
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
201 May 2012 15:56:21WBPerson2970Name_changeCGC_nameCbr-cya-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcya
RNASeq_FPKMWBls:000000224.236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
30.7411From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
34.2324From_analysisRNASeq.briggsae.WBls:0000002.control_mean
47.7201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
39.2306From_analysisRNASeq.briggsae.WBls:0000002.control_median
40.3739From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.7985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003109.466From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
140.753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
78.1784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
102.04From_analysisRNASeq.briggsae.WBls:0000003.control_mean
87.189From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004157.888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
161.204From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
164.519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
158.723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
170.033From_analysisRNASeq.briggsae.WBls:0000004.control_mean
171.104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
197.93From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.584518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.1295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.22374From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
8.31259From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.14887From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.75294From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000354.84338From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.0964From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.85816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
29.7409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.8145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.3932From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.97189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004157.154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
62.1236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
62.3756From_analysisRNASeq.briggsae.WBls:0000041.control_median
62.6276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
63.6694From_analysisRNASeq.briggsae.WBls:0000041.control_mean
72.7725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
65.9967From_analysisRNASeq.briggsae.WBls:0000041.control_median
67.0935From_analysisRNASeq.briggsae.WBls:0000041.control_mean
69.3657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
78.5177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006341.3877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
42.9854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
45.7149From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
47.4843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
52.45From_analysisRNASeq.briggsae.WBls:0000063.control_mean
84.6776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
37.8772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
44.3502From_analysisRNASeq.briggsae.WBls:0000063.control_median
50.0212From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010130.7411From_analysisRNASeq.briggsae.total_over_all_stages.control_median
45.0469From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
44.3502From_analysisRNASeq.briggsae.total_over_all_stages.control_median
57.1563From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (43)
ParalogWBGene00025758Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027722Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027981Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033670Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037214Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039171Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cyclin, C-terminal domain; Cyclin; Cyclin-like superfamily; Cyclin, N-terminal; Cyclin, N-terminal domain; and Cyclin-like. Is an ortholog of C. elegans cya-1. In C. elegans, cya-1 is involved in meiotic cell cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06936
Corresponding_CDS_historyCBG06936:bp194
Corresponding_transcriptCBG06936.1
Other_sequenceCBC00663_1
CR01303
Oden_isotig23295
CRC09445_1
CRC07178_1
CGC00144_1
Experimental_infoExpr_patternExpr1057962
Microarray_resultsGPL8303_CB6_WBGene00029121_A
GPL8303_CB6_WBGene00029121_B
GPL14143_CBG06936_870-929_0.922_6_C
GPL14143_CBG06936_1174-1233_0.907_11_B
GPL14143_CBG06936_1288-1347_0.894_18_A
MethodGene