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WormBase Tree Display for Gene: WBGene00029164

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Name Class

WBGene00029164SMapS_parentSequencecb25.fpc0305a
IdentityVersion2
NameCGC_nameCbr-col-68From_analysisInferred_from_orthology
Sequence_nameCBG06986
Molecular_nameCBG06986
CBG06986.1
CBP01796
Other_nameCBG_06986Accession_evidenceNDBHE600960
Public_nameCbr-col-68
DB_infoDatabaseNDBlocus_tagCBG_06986
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-col-68
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:00000020.825036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.25968From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.469From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.48499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.63582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.85371From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.05241From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.710628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.0398From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.36897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.23758From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.63313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000043.2952From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
3.91988From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.54457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.61106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.82714From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
3.88422From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.14314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (11)
WBls:00000272.87314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.11611From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.18924From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.57848From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.77763From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.82945From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.5428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.82885From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.12692From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.28944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.6784From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.06735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.4305From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.23829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.261898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.391864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.502174From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.612485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.9479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.05354From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.60354From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.04828From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.5946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.48093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.388554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.726086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.955822From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.31439From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.42179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.07968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.623565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.840954From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.19925From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.28944From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.13862From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.97024From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.424From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132620
Ortholog (27)
Paralog (155)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-68.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06986
Corresponding_CDS_historyCBG06986:bp194
Corresponding_transcriptCBG06986.1
Other_sequence (122)
Experimental_infoExpr_patternExpr1053967
Microarray_resultsGPL8303_CB6_WBGene00029164_A
GPL8303_CB6_WBGene00029164_B
GPL14143_CBG06986_8-67_0.806_2_C
GPL14143_CBG06986_266-325_0.740_12_B
GPL14143_CBG06986_602-661_0.727_16_A
MethodGene